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SMTL ID : 6xh7.1

CueR-TAC without RNA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-1-1-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1:	7 residues within 4Å: Chain D: C.70, L.71, C.72, G.73, K.74, C.85, C.88 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.70, D:C.72, D:C.85
ZN.2:	6 residues within 4Å: Chain D: C.814, R.883, C.888, D.889, C.895, C.898 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.814, D:C.888, D:C.895, D:C.898

2 x CU: COPPER (II) ION(Non-covalent)

CU.3:	7 residues within 4Å: Chain G: C.112, P.113, D.119, C.120, P.121, I.122 Chain H: S.77 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:C.112, G:C.120
CU.4:	7 residues within 4Å: Chain G: S.77 Chain H: C.112, P.113, G.114, S.117, C.120, P.121 2 PLIP interactions: 2 interactions with chain H Metal complexes: H:C.112, H:C.120

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Shi, W. et al., Structural basis of copper-efflux-regulator-dependent transcription activation. Iscience (2021)

Release Date

2021-04-14

Peptides

DNA-directed RNA polymerase subunit alpha: AB
DNA-directed RNA polymerase subunit beta: C
DNA-directed RNA polymerase subunit beta': D
DNA-directed RNA polymerase subunit omega: E
RNA polymerase sigma factor RpoD: F
HTH-type transcriptional regulator CueR: GH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

RNA polymerase sigma factor RpoD

HTH-type transcriptional regulator CueR

Toggle Identical (GH)

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3iyd.1 | 3lu0.1 | 4jk1.1 | 4jk1.2 | 4jk2.1 | 4jk2.2 | 4jkr.1 | 4jkr.2 | 4kmu.1 | 4kmu.2 | 4kn4.1 | 4kn4.2 | 4kn7.1 | 4kn7.2 | 4ljz.1 | 4ljz.2 | 4lk0.1 | 4lk0.2 | 4lk1.1 | 4lk1.2 | 4llg.1 | 4llg.2 | 4mex.1 | 4mex.2 | 4mey.1 | 4mey.2 | 4s20.1 | 4s20.2 | 4xsx.1 | 4xsx.2 more...less...

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