SMTL ID : 6xox.1

cryo-EM of human GLP-1R bound to non-peptide agonist LY3502970

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-mer
Ligands
1 x V6G: 3-[(1S,2S)-1-(5-[(4S)-2,2-dimethyloxan-4-yl]-2-{(4S)-2-(4-fluoro-3,5-dimethylphenyl)-3-[3-(4-fluoro-1-methyl-1H-indazol-5-yl)-2-oxo-2,3-dihydro-1H-imidazol-1-yl]-4-methyl-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carbonyl}-1H-indol-1-yl)-2-methylcyclopropyl]-1,2,4-oxadiazol-5(4H)-one(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Kawai, T. et al., Structural basis for GLP-1 receptor activation by LY3502970, an orally active nonpeptide agonist. Proc.Natl.Acad.Sci.USA (2020)
Release Date
2020-11-18
Peptides
Alpha subunit of Gs with N-terminus swapped with equivalent residues in Gi,Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
single-chain variable fragment scFv16: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
Nanobody 35: E
Glucagon-like peptide 1 receptor: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
E
D
G
E
N
F
R
Membrane
We predict this structure to be a membrane protein.

Alpha subunit of Gs with N-terminus swapped with equivalent residues in Gi,Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

single-chain variable fragment scFv16

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nanobody 35

Glucagon-like peptide 1 receptor

Related Entries With Identical Sequence

5he0.1 | 5he3.1 | 5ukm.1 | 6b3j.1 | 6crk.1 | 6d9h.1 | 6dde.1 | 6ddf.1 | 6e3y.1 | 6k41.1 | 6k42.1 | 6kpf.1 | 6kpg.1 | 6lfm.1 | 6lfo.1 | 6lmk.1 | 6lml.1 | 6m1h.1 | 6m1i.1 | 6m8s.1 | 6n4b.1 | 6nbf.1 | 6nbh.1 | 6nbi.1 | 6ni3.1 | 6niy.1 | 6oij.1 | 6oik.1 | 6orv.1 | 6os9.1  more...