SMTL ID : 6zqe.1

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-A (Poly-Ala)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-2-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Cheng, J. et al., 90 S pre-ribosome transformation into the primordial 40 S subunit. Science (2020)
Release Date
2020-09-23
Peptides
Periodic tryptophan protein 2: A
Nucleolar complex protein 14: B
Something about silencing protein 10: C
U3 small nucleolar RNA-associated protein 4: D
U3 small nucleolar RNA-associated protein 9: E
U3 small nucleolar RNA-associated protein 8: F
U3 small nucleolar RNA-associated protein 5: G
U3 small nucleolar RNA-associated protein 10: H
U3 small nucleolar RNA-associated protein 11: I
U3 small nucleolar RNA-associated protein 12: J
U3 small nucleolar RNA-associated protein 13: K
U3 small nucleolar RNA-associated protein 14: L
U3 small nucleolar RNA-associated protein 15: M
Bud site selection protein 21: N
NET1-associated nuclear protein 1: O
U3 small nucleolar RNA-associated protein 18: P
Nucleolar complex protein 4: Q
U3 small nucleolar RNA-associated protein 20: R
U3 small nucleolar RNA-associated protein 21: S
U3 small nucleolar RNA-associated protein 22: T
rRNA-processing protein FCF1: U
rRNA 2'-O-methyltransferase fibrillarin: VW
Nucleolar protein 56: X
Nucleolar protein 58: Y
13 kDa ribonucleoprotein-associated protein: Z0
Ribosomal RNA-processing protein 9: 1
U3 small nucleolar ribonucleoprotein protein IMP3: 2
U3 small nucleolar ribonucleoprotein protein IMP4: 3
U3 small nucleolar RNA-associated protein MPP10: 4
Ribosome biogenesis protein BMS1: 5
RNA 3'-terminal phosphate cyclase-like protein: 6
Ribosomal RNA-processing protein 7: 7
Probable ATP-dependent RNA helicase DHR1: 8
Ribosomal RNA small subunit methyltransferase NEP1: 9a
Essential nuclear protein 1: b
Dimethyladenosine transferase: c
rRNA-processing protein FCF2: d
40S ribosomal protein S27-A: e
Pre-rRNA-processing protein PNO1: f
40S ribosomal protein S1-A: g
40S ribosomal protein S4-A: h
40S ribosomal protein S5: i
40S ribosomal protein S6-A: j
40S ribosomal protein S7-A: k
40S ribosomal protein S8-A: l
40S ribosomal protein S9-A: m
40S ribosomal protein S11-A: n
40S ribosomal protein S13: o
40S ribosomal protein S14-A: p
40S ribosomal protein S16-A: q
40S ribosomal protein S18-A: r
40S ribosomal protein S19-A: s
40S ribosomal protein S22-A: t
40S ribosomal protein S23-A: u
40S ribosomal protein S24-A: v
40S ribosomal protein S28-A: w
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
UA
B
UB
C
UC
D
UD
E
UE
F
UH
G
UI
H
UJ
I
UK
J
UL
K
UM
L
UN
M
UO
N
UP
O
UQ
P
UR
Q
US
R
UT
S
UU
T
UV
U
UX
V
CA
W
CB
X
CD
Y
CE
Z
CF
0
CG
1
CH
2
CI
3
CJ
4
CK
5
CL
6
CM
7
CN
8
JD
9
JF
a
JG
b
JH
c
JL
d
JM
e
Db
f
JJ
g
DA
h
DE
i
DF
j
DG
k
DH
l
DI
m
DJ
n
DL
o
DN
p
DO
q
DQ
r
DS
s
DT
t
DW
u
DX
v
DY
w
Dc

Periodic tryptophan protein 2

Nucleolar complex protein 14

Something about silencing protein 10

U3 small nucleolar RNA-associated protein 4

U3 small nucleolar RNA-associated protein 9

U3 small nucleolar RNA-associated protein 8

U3 small nucleolar RNA-associated protein 5

U3 small nucleolar RNA-associated protein 10

U3 small nucleolar RNA-associated protein 11

U3 small nucleolar RNA-associated protein 12

U3 small nucleolar RNA-associated protein 13

U3 small nucleolar RNA-associated protein 14

U3 small nucleolar RNA-associated protein 15

Bud site selection protein 21

NET1-associated nuclear protein 1

U3 small nucleolar RNA-associated protein 18

Nucleolar complex protein 4

U3 small nucleolar RNA-associated protein 20

U3 small nucleolar RNA-associated protein 21

U3 small nucleolar RNA-associated protein 22

rRNA-processing protein FCF1

rRNA 2'-O-methyltransferase fibrillarin

Nucleolar protein 56

Nucleolar protein 58

13 kDa ribonucleoprotein-associated protein

Toggle Identical (Z0)

Ribosomal RNA-processing protein 9

U3 small nucleolar ribonucleoprotein protein IMP3

U3 small nucleolar ribonucleoprotein protein IMP4

U3 small nucleolar RNA-associated protein MPP10

Ribosome biogenesis protein BMS1

RNA 3'-terminal phosphate cyclase-like protein

Ribosomal RNA-processing protein 7

Probable ATP-dependent RNA helicase DHR1

Ribosomal RNA small subunit methyltransferase NEP1

Essential nuclear protein 1

Dimethyladenosine transferase

rRNA-processing protein FCF2

40S ribosomal protein S27-A

Pre-rRNA-processing protein PNO1

40S ribosomal protein S1-A

40S ribosomal protein S4-A

40S ribosomal protein S5

40S ribosomal protein S6-A

40S ribosomal protein S7-A

40S ribosomal protein S8-A

40S ribosomal protein S9-A

40S ribosomal protein S11-A

40S ribosomal protein S13

40S ribosomal protein S14-A

40S ribosomal protein S16-A

40S ribosomal protein S18-A

40S ribosomal protein S19-A

40S ribosomal protein S22-A

40S ribosomal protein S23-A

40S ribosomal protein S24-A

40S ribosomal protein S28-A

Related Entries With Identical Sequence

1zwz.1 | 1zwz.2 | 3j16.1 | 3j6x.44 | 3j6x.47 | 3j6x.48 | 3j6x.49 | 3j6x.50 | 3j6x.51 | 3j6x.52 | 3j6x.54 | 3j6x.56 | 3j6x.57 | 3j6x.59 | 3j6x.61 | 3j6x.62 | 3j6x.65 | 3j6x.66 | 3j6x.67 | 3j6x.70 | 3j6x.71 | 3j6y.44 | 3j6y.47 | 3j6y.48 | 3j6y.49 | 3j6y.50 | 3j6y.51 | 3j6y.52 | 3j6y.54 | 3j6y.56  more...