SMTL ID : 6zqf.1

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-B (Poly-Ala)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Cheng, J. et al., 90 S pre-ribosome transformation into the primordial 40 S subunit. Science (2020)
Release Date
2020-09-23
Peptides
Periodic tryptophan protein 2: A
Nucleolar complex protein 14: B
Something about silencing protein 10: C
U3 small nucleolar RNA-associated protein 12: D
U3 small nucleolar RNA-associated protein 13: E
Nucleolar complex protein 4: F
U3 small nucleolar RNA-associated protein 21: G
U3 small nucleolar RNA-associated protein 22: H
U3 small nucleolar ribonucleoprotein protein IMP3: I
U3 small nucleolar ribonucleoprotein protein IMP4: J
U3 small nucleolar RNA-associated protein MPP10: K
Ribosome biogenesis protein BMS1: L
RNA 3'-terminal phosphate cyclase-like protein: M
Ribosomal RNA-processing protein 7: N
Probable ATP-dependent RNA helicase DHR1: O
Ribosomal RNA small subunit methyltransferase NEP1: PQ
Essential nuclear protein 1: R
Dimethyladenosine transferase: S
Pre-rRNA-processing protein PNO1: T
Rps5p: U
40S ribosomal protein S16-A: V
40S ribosomal protein S18-A: W
40S ribosomal protein S19-A: X
40S ribosomal protein S28-A: Y
40S ribosomal protein S1-A: 1
40S ribosomal protein S4-A: 2
40S ribosomal protein S6-A: 3
40S ribosomal protein S7-A: 4
40S ribosomal protein S8-A: 5
40S ribosomal protein S9-A: 6
40S ribosomal protein S11-A: 7
40S ribosomal protein S13: 8
40S ribosomal protein S14-A: 9
40S ribosomal protein S25-A: a
40S ribosomal protein S22-A: b
40S ribosomal protein S23-A: c
40S ribosomal protein S24-A: d
40S ribosomal protein S27-A: e
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
UA
B
UB
C
UC
D
UL
E
UM
F
US
G
UU
H
UV
I
CI
J
CJ
K
CK
L
CL
M
CM
N
CN
O
JD
P
JF
Q
JG
R
JH
S
JL
T
JJ
U
DF
V
DQ
W
DS
X
DT
Y
Dc
1
DA
2
DE
3
DG
4
DH
5
DI
6
DJ
7
DL
8
DN
9
DO
a
DZ
b
DW
c
DX
d
DY
e
Db

Periodic tryptophan protein 2

Nucleolar complex protein 14

Something about silencing protein 10

U3 small nucleolar RNA-associated protein 12

U3 small nucleolar RNA-associated protein 13

Nucleolar complex protein 4

U3 small nucleolar RNA-associated protein 21

U3 small nucleolar RNA-associated protein 22

U3 small nucleolar ribonucleoprotein protein IMP3

U3 small nucleolar ribonucleoprotein protein IMP4

U3 small nucleolar RNA-associated protein MPP10

Ribosome biogenesis protein BMS1

RNA 3'-terminal phosphate cyclase-like protein

Ribosomal RNA-processing protein 7

Probable ATP-dependent RNA helicase DHR1

Ribosomal RNA small subunit methyltransferase NEP1

Essential nuclear protein 1

Dimethyladenosine transferase

Pre-rRNA-processing protein PNO1

Rps5p

40S ribosomal protein S16-A

40S ribosomal protein S18-A

40S ribosomal protein S19-A

40S ribosomal protein S28-A

40S ribosomal protein S1-A

40S ribosomal protein S4-A

40S ribosomal protein S6-A

40S ribosomal protein S7-A

40S ribosomal protein S8-A

40S ribosomal protein S9-A

40S ribosomal protein S11-A

40S ribosomal protein S13

40S ribosomal protein S14-A

40S ribosomal protein S25-A

40S ribosomal protein S22-A

40S ribosomal protein S23-A

40S ribosomal protein S24-A

40S ribosomal protein S27-A

Related Entries With Identical Sequence

3j16.1 | 3j6x.44 | 3j6x.47 | 3j6x.48 | 3j6x.49 | 3j6x.50 | 3j6x.51 | 3j6x.52 | 3j6x.54 | 3j6x.56 | 3j6x.57 | 3j6x.59 | 3j6x.61 | 3j6x.62 | 3j6x.65 | 3j6x.66 | 3j6x.67 | 3j6x.68 | 3j6x.70 | 3j6x.71 | 3j6y.44 | 3j6y.47 | 3j6y.48 | 3j6y.49 | 3j6y.50 | 3j6y.51 | 3j6y.52 | 3j6y.54 | 3j6y.56 | 3j6y.57  more...