SMTL ID : 7bpz.1 (1 other biounit)

X-ray structure of human PPARalpha ligand binding domain-bezafibrate-SRC1 coactivator peptide co-crystals obtained by soaking

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PEM: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID(Non-covalent)

PEM.1: 20 residues within 4Å: Chain A: I.77, F.78, C.80, C.81, Q.82, T.84, S.85, Y.119, I.122, F.123, L.126, M.135, V.137, I.159, M.160, H.245, V.249, L.261, L.265, Y.269 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.78, A:F.123, A:L.126, A:V.137 Hydrogen bonds: A:S.85, A:Y.269 Salt bridges: A:H.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamata, S. et al., PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates. Iscience (2020)

Release Date

2020-11-11

Peptides

Peroxisome proliferator-activated receptor alpha: A
15-meric peptide from Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor alpha

15-meric peptide from Nuclear receptor coactivator 1

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