SMTL ID : 7g97.1

ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z57899718

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x APY: 2-AMINOMETHYL-PYRIDINE(Covalent)

APY.1: 7 residues within 4Å: Chain A: Y.75, P.76, D.77, T.78, F.107, C.108, V.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.77, A:T.78

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: R.146, Y.157, E.159 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.146 Salt bridges: A:E.159 DMS.3: 6 residues within 4Å: Chain A: K.8, W.59, P.76, D.77 Chain B: Q.178, L.182 No protein-ligand interaction detected (PLIP) DMS.5: 7 residues within 4Å: Chain B: E.29, V.30, Q.33, H.201, S.202, H.203, G.204 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.203, B:G.204

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.4: 7 residues within 4Å: Chain A: D.14, G.15, A.16, C.17, G.18, K.19, T.20 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:A.16, A:C.17, A:G.18, A:K.19, A:T.20, A:T.20, A:T.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradshaw, W.J. et al., ARHGEF2 PanDDA analysis group deposition. To Be Published

Release Date

2023-07-12

Peptides

Transforming protein RhoA: A
Rho guanine nucleotide exchange factor 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transforming protein RhoA

Rho guanine nucleotide exchange factor 2

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