SMTL ID : 8atf.1

Nucleosome-bound Ino80 ATPase

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-2-2-2-2-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: Q.254, Q.259, M.282, G.283, L.284, G.285, K.286, T.287, F.326, D.390, G.917, N.919, R.944, R.947, L.948 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:Q.254, A:Q.259, A:G.283, A:L.284, A:G.285, A:K.286, A:T.287, A:T.287, A:D.390, A:N.919 Salt bridges: A:K.286, A:K.286, A:R.944, A:R.947, A:R.947 pi-Stacking: A:F.326

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kunert, F. et al., Structural mechanism of extranucleosomal DNA readout by the INO80 complex. Sci Adv (2022)

Release Date

2022-12-14

Peptides

Ino80 ATPase: A
PAPA-1 domain-containing protein: B
Histone H3.2: EI
Histone H4: FJ
Histone H2A: GK
Histone H2B type 1-C/E/F/G/I: HL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

E
M

I
Q

F
N

J
R

G
O

K
S

H
P

L
T

Ino80 ATPase

PAPA-1 domain-containing protein

Histone H3.2

Histone H4

Histone H2A

Histone H2B type 1-C/E/F/G/I

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