SMTL ID : 7enn.1

The structure of ALC1 bound to the nucleosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-2-2-2-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)

ADP.1: 16 residues within 4Å: Chain A: I.44, H.45, Q.50, E.72, M.73, G.74, L.75, G.76, K.77, T.78, C.79, E.113, N.429, R.457, I.458 Ligands: BEF.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:H.45, A:Q.50, A:G.74, A:G.76, A:K.77, A:T.78, A:N.429 Salt bridges: A:K.77, A:R.457, A:R.457 pi-Cation interactions: A:R.47

1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)

BEF.2: 4 residues within 4Å: Chain A: K.77, T.78, R.457 Ligands: ADP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, L. et al., Structural basis of ALC1/CHD1L autoinhibition and the mechanism of activation by the nucleosome. Nat Commun (2021)

Release Date

2021-07-14

Peptides

Chromodomain-helicase-DNA-binding protein 1-like: A
Histone H3.2: BF
Histone H4: CG
Histone H2A type 1: DH
Histone H2B 1.1: EI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
K

B
A

F
E

C
L

G
F

D
C

H
G

E
D

I
H

Chromodomain-helicase-DNA-binding protein 1-like

Histone H3.2

Histone H4

Histone H2A type 1

Histone H2B 1.1

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