SMTL ID : 8ihz.1

FACTOR INHIBITING HIF-1 ALPHA in complex with (5-(1-(3-(4-chlorophenyl)propyl)-1H-1,2,3-triazol-4-yl)-3-hydroxypicolinoyl)glycine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

14 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.33, H.98, R.143, L.285 Ligands: SO4.10 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.143, A:R.143 Salt bridges: A:R.33, A:H.98, A:R.143 SO4.2: 3 residues within 4Å: Chain A: R.33, S.34, L.285 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.34, A:S.34 Salt bridges: A:R.33 SO4.3: 5 residues within 4Å: Chain A: K.107, E.202, V.232, R.320, K.324 4 PLIP interactions: 4 interactions with chain A Water bridges: A:D.237 Salt bridges: A:K.107, A:R.320, A:K.324 SO4.4: 4 residues within 4Å: Chain A: D.222, K.311, A.312 Ligands: SO4.13 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.312 Water bridges: A:H.313 SO4.5: 7 residues within 4Å: Chain A: K.99, L.101, Y.230, S.240, Q.241, V.242, D.243 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.230, A:S.240 SO4.6: 2 residues within 4Å: Chain A: R.44, T.65 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.44 SO4.7: 4 residues within 4Å: Chain A: P.41, I.42, P.43, R.44 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.44 SO4.8: 6 residues within 4Å: Chain A: S.34, Y.35, S.36, F.244, D.245, P.247 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.36, A:S.36 SO4.9: 8 residues within 4Å: Chain A: P.221, D.222, F.224, E.225, A.312, K.315, V.316, M.319 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.315 SO4.10: 6 residues within 4Å: Chain A: R.143, E.192, G.193, L.285, N.286 Ligands: SO4.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.286, A:N.286 Salt bridges: A:R.143 SO4.11: 3 residues within 4Å: Chain A: L.163, W.167 Ligands: SO4.12 No protein-ligand interaction detected (PLIP) SO4.12: 5 residues within 4Å: Chain A: N.151, F.162, W.167, N.185 Ligands: SO4.11 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.185 SO4.13: 6 residues within 4Å: Chain A: E.60, P.220, D.222, Y.261, W.277 Ligands: SO4.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.60, A:E.60, A:D.222, A:Y.261 SO4.15: 5 residues within 4Å: Chain A: I.135, R.138, G.140, E.141, E.142 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.141, A:E.142, A:E.142 Salt bridges: A:R.138

1 x ZN: ZINC ION(Non-covalent)

ZN.14: 5 residues within 4Å: Chain A: H.199, D.201, H.279, W.296 Ligands: P1X.16 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.199, A:D.201, A:H.279

1 x P1X: 2-[[5-[1-[3-(4-chlorophenyl)propyl]-1,2,3-triazol-4-yl]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid(Non-covalent)

P1X.16: 18 residues within 4Å: Chain A: Y.102, Y.145, Q.147, T.183, L.186, L.188, T.196, H.199, D.201, Q.203, F.207, K.214, R.238, H.279, I.281, N.294, W.296 Ligands: ZN.14 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.145, A:Q.147, A:Q.147, A:T.196, A:T.196, A:R.238, A:R.238 Salt bridges: A:K.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y. et al., A Small-Molecule Inhibitor of Factor Inhibiting HIF Binding to a Tyrosine-Flip Pocket for the Treatment of Obesity. Angew.Chem.Int.Ed.Engl. (2024)

Release Date

2024-02-28

Peptides

Hypoxia-inducible factor 1-alpha inhibitor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypoxia-inducible factor 1-alpha inhibitor

Related Entries With Identical Sequence