SMTL ID : 8qr8.1

Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.195, R.198, Y.237 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.195, A:Y.237 Salt bridges: A:R.195, A:R.198 SO4.2: 3 residues within 4Å: Chain A: R.152, R.176, V.192 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.152 Salt bridges: A:R.152, A:R.176

1 x WN2: (4~{S},9~{S},10~{S})-4-methyl-9,10,17,19-tetrakis(oxidanyl)-3-oxabicyclo[13.4.0]nonadeca-1(19),15,17-triene-2,8-dione

WN2.3: 12 residues within 4Å: Chain A: I.35, G.36, E.37, A.56, Q.109, D.110, L.111, M.112, S.157, N.158, L.160, C.170 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.35, A:L.111 Hydrogen bonds: A:M.112, A:S.157 Water bridges: A:I.35, A:D.115, A:K.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand. To Be Published

Release Date

2025-04-16

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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