SMTL ID : 8stt.2 (1 other biounit)

Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) varient in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)indolizine-2-carbonitrile (JLJ555), a non-nucleoside inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.445, G.446, D.500, D.551 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.445, A:D.551

1 x 29T: 8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}indolizine-2-carbonitrile(Non-covalent)

29T.2: 14 residues within 4Å: Chain A: L.102, K.103, K.104, K.105, V.181, Y.190, G.192, P.227, F.229, W.231, L.236, H.237, P.238, Y.320 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.102, A:K.105, A:V.181, A:Y.190, A:Y.190, A:L.236 Hydrogen bonds: A:K.105, A:P.238 pi-Stacking: A:Y.190, A:W.231, A:W.231, A:W.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hollander, K. et al., Exploring novel HIV-1 reverse transcriptase inhibitors with drug-resistant mutants: A double mutant surprise. Protein Sci. (2023)

Release Date

2023-11-29

Peptides

Reverse transcriptase/ribonuclease H: A
p51 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Reverse transcriptase/ribonuclease H

p51 RT

Related Entries With Identical Sequence