SMTL ID : 3v81.2 (1 other biounit)

Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and the nonnucleoside inhibitor nevirapine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NVP: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE(Non-covalent)

NVP.1: 12 residues within 4Å: Chain A: L.102, K.103, V.108, V.181, Y.183, Y.190, G.192, W.231, L.236, H.237, P.238, Y.320 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.102, A:V.108, A:V.108, A:V.181, A:Y.183, A:Y.190, A:W.231, A:L.236, A:Y.320 pi-Stacking: A:W.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, K. et al., HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism. Nat.Struct.Mol.Biol. (2012)

Release Date

2012-01-18

Peptides

HIV-1 Reverse Transcriptase P66 subunit: A
HIV-1 Reverse Transcriptase P51 subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HIV-1 Reverse Transcriptase P66 subunit

HIV-1 Reverse Transcriptase P51 subunit

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