P0DTC1 (R1A_SARS2) Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)

Replicase polyprotein 1a UniProtKBInterProInteractive Modelling

4405 aa; Sequence (Fasta)
Identical sequences: Severe acute respiratory syndrome coronavirus 2: A0A6G7KRG6; A0A6C0M8P6

Available Structures

Host translation inhibitor nsp1 1-180; PRO_0000449635

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomer0.827k7p.1.A10-126
100.00
Assess
monomer0.702hsx.1.A13-127
86.09
Assess
monomer0.676zoj.1.8148-180
100.00
Assess

Non-structural protein 2 181-818; PRO_0000449636

DescriptionOligo-stateLigandsStructureRange
The N-terminal crystal structure of SARS-CoV-2 NSP2monomerZN;181-456
Assess
Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomerZN;0.877msw.1.A184-818
100.00
Assess

Non-structural protein 3 819-2763; PRO_0000449637

DescriptionOligo-stateLigandsStructureRange
Crystal structure of the SARS-CoV-2 papain-like protease (PLPro) C112S mutantmonomerZN;PO4;1563-1878
Assess
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 3, 4-Dihydroxybenzoic acid, meth…monomerHE9;GOL;ZN;PO4;CL;1564-1878
Assess
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 4-(2-hydroxyethyl)phenolmonomerZN;CL;YRL;1564-1878
Assess
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with p-hydroxybenzaldehydemonomerZN;CL;HBA;1564-1878
Assess
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-89monomerZN;SO4;XT7;GOL;1564-1878
Assess
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-83monomerZN;SO4;BO3;Y54;1564-1878
Assess
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-24monomerXR8;ZN;SO4;BO3;1564-1878
Assess
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with ebselenmonomer9JT;ZN;CL;GOL;IOD;FMT;NA;1565-1878
Assess
Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomer0.846ywk.3.A1025-1194
100.00
Assess
monomerNHE;0.846vxs.1.A1025-1191
100.00
Assess
monomerACE;ZN;0.796wuu.2.A1562-1879
99.69
Assess
monomer0.792w2g.1.A1231-1494
75.00
Assess
monomer0.762kqv.1.A1369-1493
78.13
Assess
monomer0.712idy.1.A819-925
78.50
Assess
monomer0.702kqw.1.A1496-1550
80.22
Assess
monomer0.692k87.1.A1907-2021
81.74
Assess

Non-structural protein 4 2764-3263; PRO_0000449638

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
homo-2-mer0.723vcb.1.A3174-3262
61.36
Assess

3C-like proteinase 3264-3569; PRO_0000449639

DescriptionOligo-stateLigandsStructureRange
SARS-CoV-2 3CL protease (3CLpro) in complex with 7-O-methyl-myricetinhomo-2-merHER;GOL;3264-3569
Assess
Crystal structure of SARS CoV2 main protease in complex with EG009 (modelled using PanDDA event map)homo-2-merDMS;USH;3264-3569
Assess
Crystal structure of SARS-CoV-2 main protease (no ligand)homo-2-merDMS;3264-3568
Assess
Crystal structure of SARS CoV2 main protease in complex with DN_EG_002 (modelled using PanDDA event…homo-2-merDMS;US8;3264-3568
Assess
Crystal structure of the SARS-CoV-2 main protease in complex with Y180homo-2-mer2RI;NA;3264-3568
Assess
Crystal structure of SARS CoV2 main protease in complex with FSP006homo-2-merDMS;CL;URK;PEG;3264-3568
Assess
Crystal structure of SARS CoV2 main protease in complex with FSCU015homo-2-merDMS;UQZ;3264-3568
Assess
Crystal structure of SARS CoV2 main protease in complex with FSP007homo-2-merDMS;UQW;3264-3568
Assess
Crystal structure of Zinc bound SARS-CoV-2 main proteasehomo-2-merZN;DMS;GLY;CL;BTB;3264-3567
Assess
SARS-CoV-2 3CL protease (3CLpro) in complex with myricetinhomo-2-merMYC;3264-3564
Assess
Crystal Structure of SARS-CoV-2 main protease in complex with LON-WEI-adc59df6-47homo-2-merUSZ;DMS;CL;3264-3564
Assess
Crystal structure of SARS-CoV-2 main protease in complex with (R)-1ahomo-2-mer2XI;3264-3564
Assess
SARS-CoV-2 3CL protease (3CLpro) in complex with 7-O-methyl-dihydromyricetinhomo-2-merHF0;3264-3564
Assess
SARS-CoV-2 main proteinase complex with microbial metabolite leupeptinhomo-2-mer3264-3563
Assess

Non-structural protein 7 3860-3942; PRO_0000449641

DescriptionOligo-stateLigandsStructureRange
Nonstructural protein 7 and 8 complex of SARS-CoV-2 Heteromer
3862-4134
Assess
Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomer0.807jlt.1.A3860-3938
100.00
Assess
monomer0.796m71.1.B3861-3930
100.00
Assess
monomer0.752ahm.1.B3860-3933
98.80
Assess

Non-structural protein 8 3943-4140; PRO_0000449642

DescriptionOligo-stateLigandsStructureRange
Nonstructural protein 7 and 8 complex of SARS-CoV-2 Heteromer
3862-4134
Assess
Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomer0.757jlt.1.D4019-4135
100.00
Assess
monomer0.742ahm.1.H3944-4134
97.47
Assess
monomer0.692ahm.1.E3980-4134
97.47
Assess

Non-structural protein 9 4141-4253; PRO_0000449643

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
homo-2-mer0.801qz8.1.A4143-4253
97.35
Assess
homo-2-mer0.806w4b.1.A4141-4253
100.00
Assess
homo-2-mer0.751uw7.1.B4141-4253
97.35
Assess

Non-structural protein 10 4254-4392; PRO_0000449644

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
homo-12-mer24×ZN;0.792g9t.1.A4261-4382
97.12
Assess
monomerZN;0.786w4h.1.B4271-4386
100.00
Assess

Alignments