Q00959 (NMDE1_RAT) Rattus norvegicus (Rat)

Glutamate receptor ionotropic, NMDA 2A UniProtKBInterProSTRINGInteractive Modelling

1464 aa; Sequence (Fasta)

Sequence Features

Add
 44Zinc; via tele nitrogen
 128Zinc; via tele nitrogen
 266Zinc
 282Zinc
 614Functional determinant of NMDA receptors
 556-576Helical
 601-620Discontinuously helical
 626-645Helical
 817-837Helical
 87-320
 429-455
 436-456
 745-800
 107-268Receptor, ligand binding region
IPR001828PF01094
 440-539Ionotropic glutamate receptor, L-glutamate and glycine-binding domain
IPR019594PF10613
 555-828Ionotropic glutamate receptor
IPR001320PF00060
 839-1464Glutamate [NMDA] receptor, epsilon subunit, C-terminal
IPR018884PF10565

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glyci… Heteromer
P35439;
34×NAG;6mmb34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Asymmetric' conformation, in co… Heteromer
P35439;
NAG; 28×NAG;6mmu34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Super-Splayed' conformation, in complex with glyci… Heteromer
P35439;
34×NAG;6mmj34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine a… Heteromer
P35439;
NAG; 28×NAG;6mmk34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
P35439;
12×NAG; 22×NAG;6mmn34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in com… Heteromer
P35439;
NAG; 29×NAG;6mms34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '1-Knuckle' conformation, in complex with … Heteromer
P35439;
NAG; 29×NAG;6mmt34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
P35439;
NAG; 26×NAG;6mmg34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine a… Heteromer
P35439;
34×NAG;6mm934-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-2' conformation, in complex with glycine … Heteromer
P35439;
34×NAG;6mmh34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
P35439;
34×NAG;6mmr34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended' conformation, in complex with glycine an… Heteromer
P35439;
34×NAG;6mma34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Splayed-Open' conformation, in complex with glycin… Heteromer
P35439;
13×NAG; 21×NAG;6mmi34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Asymmetric' conformation, in complex wit… Heteromer
P35439;
NAG; 30×NAG;6mml34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the 'Extended-1' conformation, in complex with glycine … Heteromer
P35439;
NAG; 28×NAG;6mmm34-837
Assess
Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with… Heteromer
P35439;
NAG; 28×NAG;6mmp34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Symmetric' conformation, in com… Heteromer
P35439;
NAG; 30×NAG;6mmw34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the 'Extended' conformation, in complex with g… Heteromer
P35439;
NAG; 25×NAG;6mmx34-837
Assess
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* Extracellular Domain in the '2-Knuckle-Asymmetric… Heteromer
P35439;
NAG; 26×NAG;6mmv34-800
Assess
CRYSTAL STRUCTURE OF GLUN1/GLUN2A LIGAND-BINDING DOMAIN IN COMPLEX WITH GLYCINE AND NVP-AAM077 Heteromer
P35439;
GLY;GOL;84J;5u8c402-802
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;N9A;6ovd403-802
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and gluta… Heteromer
P35439;
GLY;GLU;6uz6402-800
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and glutamate in PE… Heteromer
P35439;
GLY;GLU;4nf8402-800
Assess
Crystal structure of GLUN1/GLUN2A ligand-binding domain in complex with glycine and homoquinolinic … Heteromer
P35439;
GLY;GOL;QM1;6uzr402-800
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and homoq… Heteromer
P35439;
GLY;QM1;6uzg402-800
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;N9D;6ove403-801
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and PPDA Heteromer
P35439;
GLY;2JL;4nf6402-800
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;5DX;5vij403-801
Assess
Crystal structure of GLUN1/GLUN2A ligand-binding domain in complex with glycine and UBP791 Heteromer
P35439;
GLY;QM4;6uzw402-800
Assess
Agonist-bound GluN1/GluN2A agonist binding domains with TCN201 Heteromer
P35439;
GLY;GLU;67P;5i56402-800
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and SDZ 220-040 Heteromer
P35439;
GLY;QGP;GOL;6usv402-800
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;5DZ;PEG;5vih403-801
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;5E0;5dex403-801
Assess
Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and UBP791 Heteromer
P35439;
GOL;GLY;QM4;6uzx402-800
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and D-AP5 Heteromer
P35439;
GLY;GOL;2JJ;4nf5404-801
Assess
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist… Heteromer
P35439;
GLY;5DY;PEG;TRS;5vii403-800
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with DCKA and glutamate Heteromer
P35439;
2JK;GLU;4nf4403-800
Assess
Crystal structure of GluN1/GluN2A ligand-binding domain in complex with L689,560 and glutamate Heteromer
P35439;
QGM;GLU;6usu403-800
Assess
Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains with MPX 007 Heteromer
P35439;
GLY;GLU;67Q;5i59403-800
Assess
GLUTAMATE- AND GLYCINE-BOUND GLUN1/GLUN2A AGONIST BINDING DOMAINS WITH MPX-004 Heteromer
P35439;
GLY;GLU;67R;5i58403-800
Assess
Glutamate- and DCKA-bound GluN1/GluN2A agonist binding domains with MPX-007 Heteromer
P35439;
2JK;6ND;GLU;5jty403-800
Assess
Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains Heteromer
P35439;
GLY;GLU;5i57404-800
Assess
Crystal Structure Of The NR1/NR2A ligand-binding cores complex Heteromer
P35439;
GLY;GLU;2a5t404-800
Assess
Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2A in comple… Heteromer
A0A1L8F5J9;
ZN;NAG;SO4;GOL;5tq234-390
Assess
Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2A in the pr… Heteromer
A0A1L8F5J9;
NAG;GOL; 12×SO4;IPA;5tq034-388
Assess
Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2A in comple… Heteromer
A0A1L8F5J9;
NAG;SO4;GOL;ZN;5tpw34-387
Assess
Crystal structure of GluN2A agonist binding domain with 4-butyl-(S)-CCG-IVhomo-2-mer M7V;6odl404-801
Assess
GluN2A ligand-binding core in complex with propyl-NHP5Gmonomer 1N4;4jwx404-801
Assess
Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamatemonomer GLU;2a5s404-801
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -2.88 4tll.1.D32-842
72.08JEG;
Assess
monomer -2.97 6whs.1.B33-844
72.38
Assess
monomer -3.99 6wi1.1.A122-838
31.13
Assess