SMTL ID : 1ec0.1

HIV-1 protease in complex with the inhibitor bea403

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

1 x BED: N,N-[2,5-O-DI-2-FLUORO-BENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL](Non-covalent)

BED.1: 30 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 28 PLIP interactions: 15 interactions with chain B, 13 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:D.30, B:V.32, B:I.47, B:I.47, B:P.81, B:V.82, A:L.23, A:A.28, A:D.30, A:V.32, A:I.47, A:I.50, A:P.81, A:V.82 Hydrogen bonds: B:R.8, B:D.25, B:G.27, B:G.27, B:D.29, A:R.8, A:G.27, A:G.27, A:D.29, A:I.50 Water bridges: B:I.50, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lindberg, J. et al., Symmetric fluoro-substituted diol-based HIV protease inhibitors. Ortho-fluorinated and meta-fluorinated P1/P1'-benzyloxy side groups significantly improve the antiviral activity and preserve binding efficacy. Eur.J.Biochem. (2004)

Release Date

2002-06-26

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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