SMTL ID : 1g2k.1

HIV-1 PROTEASE WITH CYCLIC SULFAMIDE INHIBITOR, AHA047

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

1 x NM1: 3-(7-BENZYL-4,5-DIHYDROXY-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1L6-[1,2,7]THIADIAZEPAN-2-YLMETHYL)-N-METHYL-BENZAMIDE(Non-covalent)

NM1.1: 27 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, V.32, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, G.48, G.49, I.50, P.81, V.82, I.84 25 PLIP interactions: 13 interactions with chain A, 12 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:V.32, A:I.50, A:P.81, A:V.82, B:L.23, B:A.28, B:D.30, B:V.32, B:I.50, B:P.81, B:V.82 Hydrogen bonds: A:D.29, A:D.30, A:I.50, B:D.25, B:G.27, B:I.50 Water bridges: A:G.48, A:G.48, B:R.8, B:R.8 Salt bridges: A:D.25, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schaal, W. et al., Synthesis and comparative molecular field analysis (CoMFA) of symmetric and nonsymmetric cyclic sulfamide HIV-1 protease inhibitors. J.Med.Chem. (2001)

Release Date

2001-06-01

Peptides

PROTEASE RETROPEPSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE RETROPEPSIN

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