SMTL ID : 1npw.1

Crystal structure of HIV protease complexed with LGZ479

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x LGZ: CARBAMIC ACID 1-{5-BENZYL-5-[2-HYDROXY-4-PHENYL-3-(TETRAHYDRO-FURAN- 3-YLOXYCARBONYLAMINO)-BUTYL]-4-OXO-4,5-DIHYDRO-1H-PYRROL-3-YL}- INDAN-2-YL ESTER(Non-covalent)

LGZ.1: 27 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, G.48, G.49, P.81, V.82, I.84 23 PLIP interactions: 12 interactions with chain B, 11 interactions with chain A Hydrophobic interactions: B:L.23, B:P.81, B:P.81, B:V.82, B:I.84, A:L.23, A:A.28, A:V.32, A:I.47, A:V.82, A:I.84, A:I.84 Hydrogen bonds: B:R.8, B:D.25, B:G.27, B:D.29, B:D.30, B:D.30, A:D.25, A:D.29, A:D.29, A:I.50 Water bridges: B:D.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith III, A.B. et al., Design, synthesis, and biological evaluation of monopyrrolinone-based HIV-1 protease inhibitors. J.Med.Chem. (2003)

Release Date

2003-02-04

Peptides

POL polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL polyprotein

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