SMTL ID : 2v16.1

Crystal Structure of Renin with Inhibitor 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-hexamer

Ligands

6 x C47: METHYL (3R)-1-[(5S,6S,8R)-5-AMINO-9-BUTYLAMINO-6-HYDROXY-3,3,8-TRIMETHYL-9-OXO-NONANOYL]-3,4-DIHYDRO-2H-QUINOLINE-3-CARBOXYLATE

C47.1: 19 residues within 4Å: Chain A: T.18, Q.19, Y.20, V.36, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, A.122, F.124, D.226, T.227, G.228, A.229, S.230 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Q.19, A:Y.83, A:Y.83, A:P.118, A:A.122, A:F.124 Hydrogen bonds: A:D.38, A:D.38, A:G.40, A:G.40, A:S.84, A:T.85 Water bridges: A:S.230 pi-Stacking: A:F.124 C47.2: 19 residues within 4Å: Chain B: T.18, Q.19, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, L.121, A.122, I.137, L.224, D.226, T.227, G.228, A.229, S.230 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Y.83, B:Y.83, B:P.118, B:L.121, B:I.137, B:L.224 Hydrogen bonds: B:D.38, B:G.40, B:S.41, B:S.84, B:T.85 pi-Stacking: B:F.124 C47.3: 19 residues within 4Å: Chain C: T.18, Q.19, Y.20, V.36, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, A.122, F.124, D.226, T.227, G.228, A.229, S.230 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:Q.19, C:Y.83, C:Y.83, C:P.118, C:A.122, C:F.124 Hydrogen bonds: C:D.38, C:D.38, C:G.40, C:G.40, C:S.84, C:T.85 Water bridges: C:S.230 pi-Stacking: C:F.124 C47.4: 19 residues within 4Å: Chain D: T.18, Q.19, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, L.121, A.122, I.137, L.224, D.226, T.227, G.228, A.229, S.230 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:Y.83, D:Y.83, D:P.118, D:L.121, D:I.137, D:L.224 Hydrogen bonds: D:D.38, D:G.40, D:S.41, D:S.84, D:T.85 pi-Stacking: D:F.124 C47.5: 19 residues within 4Å: Chain E: T.18, Q.19, Y.20, V.36, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, A.122, F.124, D.226, T.227, G.228, A.229, S.230 14 PLIP interactions: 14 interactions with chain E Hydrophobic interactions: E:Q.19, E:Y.83, E:Y.83, E:P.118, E:A.122, E:F.124 Hydrogen bonds: E:D.38, E:D.38, E:G.40, E:G.40, E:S.84, E:T.85 Water bridges: E:S.230 pi-Stacking: E:F.124 C47.6: 19 residues within 4Å: Chain F: T.18, Q.19, D.38, G.40, S.41, R.82, Y.83, S.84, T.85, P.118, L.121, A.122, I.137, L.224, D.226, T.227, G.228, A.229, S.230 12 PLIP interactions: 12 interactions with chain F Hydrophobic interactions: F:Y.83, F:Y.83, F:P.118, F:L.121, F:I.137, F:L.224 Hydrogen bonds: F:D.38, F:G.40, F:S.41, F:S.84, F:T.85 pi-Stacking: F:F.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rahuel, J. et al., Structure-Based Drug Design: The Discovery of Novel Nonpeptide Orally Active Inhibitors of Human Renin. Chem.Biol. (2000)

Release Date

2008-07-08

Peptides

RENIN: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
O

C
C

D
O

E
C

F
O

RENIN

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