SMTL ID : 2znn.1

Human PPAR alpha ligand binding domain in complex with a synthetic agonist TIPP703

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x S44: (2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid(Non-covalent)

S44.1: 23 residues within 4Å: Chain A: L.52, A.55, E.56, L.59, V.60, F.78, C.80, C.81, Q.82, T.84, S.85, Y.119, F.123, L.126, M.135, V.137, I.159, M.160, K.163, F.164, H.245, L.265, Y.269 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.52, A:A.55, A:E.56, A:L.59, A:V.60, A:F.78, A:Q.82, A:T.84, A:F.123, A:V.137, A:V.137, A:I.159, A:M.160, A:K.163, A:F.164 Hydrogen bonds: A:T.84, A:S.85, A:S.85, A:Y.119, A:Y.269 Salt bridges: A:H.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oyama, T. et al., Adaptability and selectivity of human peroxisome proliferator-activated receptor (PPAR) pan agonists revealed from crystal structures. Acta Crystallogr.,Sect.D (2009)

Release Date

2009-05-05

Peptides

Peroxisome proliferator-activated receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor alpha

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