SMTL ID : 3bhe.1

HIV-1 protease in complex with a three armed pyrrolidine derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

1 x BZN: N-({(3R,4R)-4-[(benzyloxy)methyl]pyrrolidin-3-yl}methyl)-N-(2-methylpropyl)benzenesulfonamide(Non-covalent)

BZN.1: 17 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, G.49, I.50, P.81, I.84 Chain B: D.25, G.27, A.28, I.47, G.48, G.49, I.50, I.54, I.84 12 PLIP interactions: 6 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:L.23, A:I.50, A:I.50, A:I.84, B:I.47, B:I.47, B:I.50, B:I.54, B:I.84 Hydrogen bonds: A:D.25, B:I.50 Salt bridges: A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boettcher, J. et al., HIV-1 protease in complex with a three armed pyrrolidine derivative. To be Published

Release Date

2008-12-09

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

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