SMTL ID : 3is9.1

Crystal structure of the HIV-1 reverse transcriptase (RT) in complex with the alkenyldiarylmethane (ADAM) Non-nucleoside RT Inhibitor dimethyl 3,3'-(6-methoxy-6-oxohex-1-ene-1,1-diyl)bis(5-cyano-6-methoxybenzoate).

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AC7: dimethyl 3,3'-(6-methoxy-6-oxohex-1-ene-1,1-diyl)bis(5-cyano-6-methoxybenzoate)(Non-covalent)

AC7.1: 19 residues within 4Å: Chain A: P.98, L.103, K.104, V.109, V.111, V.182, Y.184, Y.191, V.192, G.193, K.226, F.230, L.231, W.232, L.237, H.238, P.239, Y.321 Chain B: E.138 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.109, A:Y.184, A:Y.184, A:Y.191, A:F.230, A:W.232, A:W.232, A:W.232, A:L.237 Salt bridges: A:K.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cullen, M.D. et al., Crystallographic study of a novel subnanomolar inhibitor provides insight on the binding interactions of alkenyldiarylmethanes with human immunodeficiency virus-1 reverse transcriptase. J.Med.Chem. (2009)

Release Date

2010-04-07

Peptides

Reverse transcriptase/ribonuclease H: A
Reverse transcriptase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

Reverse transcriptase

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