SMTL ID : 3lmp.1

Crystal structure of the PPARgamma-LBD complexed with a cercosporamide derivative modulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CEK: (9aS)-8-acetyl-1,7-dihydroxy-3-methoxy-9a-methyl-N-(1-naphthylmethyl)-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-carboxamide(Non-covalent)

CEK.1: 15 residues within 4Å: Chain A: I.68, K.69, G.90, C.91, F.93, R.94, S.95, L.136, M.140, I.147, S.148, M.154, L.159, M.170, K.173 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.68, A:K.69, A:L.136, A:I.147, A:K.173, A:K.173 Water bridges: A:S.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furukawa, A. et al., Discovery of a novel selective PPARgamma modulator from (-)-Cercosporamide derivatives. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-04-14

Peptides

Peroxisome proliferator-activated receptor gamma: A
Peptide of Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Peroxisome proliferator-activated receptor gamma

Peptide of Nuclear receptor coactivator 1

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