- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x 3M2: (5Z)-2-amino-5-(3,5-dibromo-4-hydroxybenzylidene)-1-methyl-1,5-dihydro-4H-imidazol-4-one(Non-covalent)
3M2.1: 15 residues within 4Å:- Chain A: K.15, L.17, T.106, A.108, L.110, S.117
- Chain C: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119
- Ligands: 3M2.5
8 PLIP interactions:4 interactions with chain A, 4 interactions with chain C- Hydrophobic interactions: A:L.17, C:L.17
- Hydrogen bonds: A:K.15, A:K.15, A:S.117, C:K.15, C:S.117, C:S.117
3M2.2: 8 residues within 4Å:- Chain A: F.64, V.65, E.66, N.98, D.99, S.100, G.101, P.102
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:N.98
- Halogen bonds: A:F.64
3M2.3: 15 residues within 4Å:- Chain B: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119
- Chain D: K.15, L.17, T.106, A.108, L.110, S.117
- Ligands: 3M2.7
8 PLIP interactions:3 interactions with chain D, 5 interactions with chain B- Hydrophobic interactions: D:L.17, B:L.17, B:A.108
- Hydrogen bonds: D:K.15, D:S.117, B:K.15, B:S.117, B:S.117
3M2.4: 8 residues within 4Å:- Chain B: F.64, V.65, E.66, N.98, D.99, S.100, G.101, P.102
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:N.98
- Halogen bonds: B:F.64
3M2.5: 15 residues within 4Å:- Chain A: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119
- Chain C: K.15, L.17, T.106, A.108, L.110, S.117
- Ligands: 3M2.1
8 PLIP interactions:5 interactions with chain A, 3 interactions with chain C- Hydrophobic interactions: A:L.17, C:L.17
- Hydrogen bonds: A:K.15, A:K.15, A:S.117, A:S.117, C:K.15, C:S.117
3M2.6: 8 residues within 4Å:- Chain C: F.64, V.65, E.66, N.98, D.99, S.100, G.101, P.102
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:N.98
- Halogen bonds: C:F.64
3M2.7: 15 residues within 4Å:- Chain B: K.15, L.17, T.106, A.108, L.110, S.117
- Chain D: K.15, L.17, T.106, A.108, L.110, S.117, T.118, T.119
- Ligands: 3M2.3
8 PLIP interactions:5 interactions with chain D, 3 interactions with chain B- Hydrophobic interactions: D:L.17, D:A.108, B:L.17
- Hydrogen bonds: D:K.15, D:S.117, D:S.117, B:K.15, B:S.117
3M2.8: 8 residues within 4Å:- Chain D: F.64, V.65, E.66, N.98, D.99, S.100, G.101, P.102
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:N.98
- Halogen bonds: D:F.64
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Alhamadsheh, M.M. et al., Potent kinetic stabilizers that prevent transthyretin-mediated cardiomyocyte proteotoxicity. Sci Transl Med (2011)
- Release Date
- 2011-08-24
- Peptides
- Transthyretin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
SMTL ID : 3p3s.1
Human transthyretin (TTR) complexed with (Z)-5-(3,5-dibromo-4-hydroxybenzylidene)-imino-1-methylimidazolidin-4-one
Transthyretin
Toggle Identical (ABCD)Related Entries With Identical Sequence
1bm7.1 | 1bmz.1 | 1bmz.2 | 1e3f.1 | 1e4h.1 | 1e5a.1 | 1f41.1 | 1ict.1 | 1ict.2 | 1tt6.1 | 1tta.1 | 1tyr.1 | 1tyr.2 | 1tz8.1 | 1tz8.2 | 1tz8.3 | 1u21.1 | 1y1d.1 | 1z7j.1 | 2b15.1 | 2b77.1 | 2b9a.1 | 2f7i.1 | 2f8i.1 | 2f8i.2 | 2fbr.1 | 2flm.1 | 2g4g.1 | 2g5u.1 | 2g9k.1 more...less...2gab.1 | 2h4e.1 | 2qgb.1 | 2qgc.1 | 2qgd.1 | 2qge.1 | 2rox.1 | 2roy.1 | 3a4d.1 | 3b56.1 | 3bsz.1 | 3cbr.1 | 3cn0.1 | 3cn0.2 | 3cn1.1 | 3cn1.2 | 3cn2.1 | 3cn2.2 | 3cn3.1 | 3cn3.2 | 3cn4.1 | 3cn4.2 | 3d2t.1 | 3d7p.1 | 3esn.1 | 3eso.1 | 3esp.1 | 3glz.1 | 3glz.2 | 3gs0.1 | 3gs0.2 | 3gs4.1 | 3gs4.2 | 3gs7.1 | 3gs7.2 | 3hj0.1 | 3imr.1 | 3ims.1 | 3imt.1 | 3imu.1 | 3imv.1 | 3imw.1 | 3ipb.1 | 3ipe.1 | 3kgu.1 | 3m1o.1 | 3p3r.1 | 3p3t.1 | 3p3u.1 | 3tct.1 | 3w3b.1 | 4ac4.1 | 4act.1 | 4fi6.1 | 4fi7.1 | 4fi8.1 | 4hjt.1 | 4hju.1 | 4i85.1 | 4iiz.1 | 4ik6.1 | 4ik7.1 | 4iki.1 | 4ikj.1 | 4ikk.1 | 4ikl.1 | 4ky2.1 | 4l1s.1 | 4l1t.1 | 4mas.1 | 4mrb.1 | 4pm1.1 | 4qxv.1 | 4tq8.1 | 4tqh.1 | 4tqi.1 | 4tqp.1 | 4wnj.1 | 4wns.1 | 4wo0.1 | 5aks.1 | 5akt.1 | 5akv.1 | 5al0.1 | 5al8.1 | 5boj.1 | 5e23.1 | 5en3.1 | 5hjg.1 | 5ihh.1 | 5jid.1 | 5jim.1 | 5jiq.1 | 5l4f.1 | 5l4i.1 | 5l4j.1 | 5l4m.1 | 5tzl.1 | 6gr7.1 | 6grp.1 | 7qc5.1 | 7z60.1 | 8ade.1 | 8c85.1 | 8c86.1