SMTL ID : 4mas.1

High Resolution Structure of Wild Type Human Transthyretin in Complex with 3,3',5,5'-tetrachloro-[1,1'-biphenyl]-4,4'diol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.22 Å

Oligo State

homo-tetramer

Ligands

4 x PCQ: 3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL(Non-covalent)

PCQ.1: 15 residues within 4Å: Chain A: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain C: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: PCQ.3 10 PLIP interactions: 5 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: A:L.17, A:A.108, C:L.17, C:A.108 Hydrogen bonds: A:K.15, A:S.117, A:S.117, C:K.15, C:K.15, C:S.117 PCQ.2: 15 residues within 4Å: Chain B: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain D: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: PCQ.4 10 PLIP interactions: 5 interactions with chain B, 5 interactions with chain D Hydrophobic interactions: B:L.17, B:A.108, D:L.17, D:A.108 Hydrogen bonds: B:K.15, B:K.15, B:S.117, D:K.15, D:S.117, D:S.117 PCQ.3: 15 residues within 4Å: Chain A: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain C: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: PCQ.1 10 PLIP interactions: 5 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: A:L.17, A:A.108, C:L.17, C:A.108 Hydrogen bonds: A:K.15, A:K.15, A:S.117, C:K.15, C:S.117, C:S.117 PCQ.4: 15 residues within 4Å: Chain B: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain D: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: PCQ.2 10 PLIP interactions: 5 interactions with chain B, 5 interactions with chain D Hydrophobic interactions: B:L.17, B:A.108, D:L.17, D:A.108 Hydrogen bonds: B:K.15, B:S.117, B:S.117, D:K.15, D:K.15, D:S.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Connelly, S. et al., High Resolution Structure of Wild Type Human Transthyretin in Complex with 3,3',5,5'-tetrachloro-[1,1'-biphenyl]-4,4'diol. To be Published

Release Date

2013-09-25

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transthyretin

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