SMTL ID : 3rsx.1

Structure of Bace-1 (Beta-Secretase) in Complex with 6-(Thiophen-3-yl)quinolin-2-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.48 Å

Oligo State

monomer

Ligands

4 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: H.64, T.122, E.123, S.124 Ligand excluded by PLIP IOD.2: 1 residues within 4Å: Chain A: K.126 Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: R.115 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: R.368 Ligand excluded by PLIP

1 x RSV: 6-(thiophen-3-yl)quinolin-2-amine(Non-covalent)

RSV.5: 11 residues within 4Å: Chain A: D.51, G.53, V.88, Y.90, G.93, K.94, W.95, F.127, I.137, D.247, G.249 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.90, A:Y.90, A:Y.90, A:F.127, A:I.137 Hydrogen bonds: A:D.51 pi-Stacking: A:F.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, Y. et al., From Fragment Screening to In Vivo Efficacy: Optimization of a Series of 2-Aminoquinolines as Potent Inhibitors of Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1). J.Med.Chem. (2011)

Release Date

2011-08-31

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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