SMTL ID : 4f9m.1

Crystal structure of the PPARgamma-LBD complexed with a cercosporamide derivative modulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FCM: (9aS)-8-acetyl-N-[(2-ethyl-4-fluoronaphthalen-1-yl)methyl]-1,7-dihydroxy-3-methoxy-9a-methyl-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-carboxamide(Non-covalent)

FCM.1: 18 residues within 4Å: Chain A: I.68, K.69, I.87, G.90, C.91, F.93, R.94, S.95, I.132, L.136, M.140, I.147, S.148, M.154, L.159, F.169, M.170, K.173 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.68, A:K.69, A:R.94, A:I.132, A:L.136, A:L.136, A:I.147, A:K.173 Hydrogen bonds: A:K.69 Water bridges: A:S.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furukawa, A. et al., Synthesis and biological evaluation of novel (-)-cercosporamide derivatives as potent selective PPARg modulators. Eur.J.Med.Chem. (2012)

Release Date

2012-08-08

Peptides

Peroxisome proliferator-activated receptor gamma: A
peptide from Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Peroxisome proliferator-activated receptor gamma

peptide from Nuclear receptor coactivator 1

Related Entries With Identical Sequence