SMTL ID : 5fg5.2 (1 other biounit)

Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 4 residues within 4Å: Chain A: P.8, F.9, L.12, A.112 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.8

1 x 5XF: ~{N}-(1,3-dimethyl-2-oxidanylidene-6-pyrrolidin-1-yl-benzimidazol-5-yl)-2-methoxy-benzamide(Non-covalent)

5XF.2: 12 residues within 4Å: Chain A: N.27, I.28, F.29, E.31, V.33, P.34, E.37, V.38, C.80, Y.83, N.84, F.90 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:E.31, A:E.37, A:E.37, A:V.38 Hydrogen bonds: A:N.84 pi-Stacking: A:F.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tallant, C. et al., Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe. To Be Published

Release Date

2015-12-30

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peregrin

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