SMTL ID : 5mwg.1 (1 other biounit)

Crystal structure of the human BRPF1 bromodomain in complex with BZ091

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x WGX: ~{N}-[1,4-dimethyl-2,3-bis(oxidanylidene)-7-piperidin-1-yl-quinoxalin-6-yl]-5,6,7,8-tetrahydronaphthalene-2-sulfonamide(Non-covalent)

WGX.1: 12 residues within 4Å: Chain A: I.28, F.29, V.33, P.34, E.37, V.38, Y.41, C.80, Y.83, N.84, I.89, F.90 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.89 Hydrogen bonds: A:N.84 pi-Stacking: A:F.90, A:F.90, A:F.90

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 5 residues within 4Å: Chain A: L.6, T.7, L.10, I.11, R.14 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.7, A:R.14, A:R.14 Water bridges: A:L.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J. et al., Structure-based discovery of selective BRPF1 bromodomain inhibitors. Eur J Med Chem (2018)

Release Date

2018-02-14

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin

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