SMTL ID : 8qb0.1

Crystal Structure of BRPF1 bromodomain in complex with acetyl-pyrrole derivative compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x Q9U: 2-[4-(3,6,6-trimethyl-4-oxidanylidene-5,7-dihydro-2~{H}-isoindol-1-yl)-1,3-thiazol-2-yl]guanidine

Q9U.1: 11 residues within 4Å: Chain A: I.28, F.29, V.33, P.34, E.37, V.38, Y.41, C.80, Y.83, N.84, F.90 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.29, A:V.33, A:V.33, A:V.38, A:Y.41, A:Y.83, A:F.90, A:F.90, A:F.90 Hydrogen bonds: A:I.28, A:N.84 Salt bridges: A:E.37

1 x NO3: NITRATE ION

NO3.2: 5 residues within 4Å: Chain A: L.81, K.86, Y.91, V.95, R.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.91, A:Y.91, A:R.98, A:R.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cazzanelli, G. et al., Dual BET/BRPF1 inhibitors induce morphological alteration and cellular death in various human cancer cell lines. To be published

Release Date

2024-09-11

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin

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