SMTL ID : 5myg.4 (3 other biounits)

Crystal structure of the bromodomain of human BRPF1 in complex with NI-57 chemical probe

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x LS8: 4-cyano-~{N}-(1,3-dimethyl-2-oxidanylidene-quinolin-6-yl)-2-methoxy-benzenesulfonamide(Non-covalent)

LS8.1: 10 residues within 4Å: Chain A: N.27, I.28, F.29, V.33, P.34, E.37, V.38, Y.83, N.84, F.90 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.28, A:F.29, A:V.33, A:P.34, A:E.37, A:V.38 Hydrogen bonds: A:N.84 pi-Stacking: A:F.90, A:F.90, A:F.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Igoe, N. et al., Design of a Chemical Probe for the Bromodomain and Plant Homeodomain Finger-Containing (BRPF) Family of Proteins. J. Med. Chem. (2017)

Release Date

2017-08-09

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Peregrin

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