SMTL ID : 5o4s.1 (1 other biounit)

Crystal structure of the human BRPF1 bromodomain in complex with BZ135

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x 9KW: ~{N}-[1,4-dimethyl-7-morpholin-4-yl-2,3-bis(oxidanylidene)quinoxalin-6-yl]-5,6,7,8-tetrahydronaphthalene-2-sulfonamide(Non-covalent)

9KW.1: 12 residues within 4Å: Chain A: N.27, I.28, F.29, V.33, P.34, E.37, V.38, Y.41, C.80, Y.83, N.84, F.90 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.90 Hydrogen bonds: A:N.84 pi-Stacking: A:F.90, A:F.90, A:F.90

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 5 residues within 4Å: Chain A: F.66, E.70, L.105, R.106, R.109 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.70, A:R.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J. et al., Structure-based discovery of selective BRPF1 bromodomain inhibitors. Eur J Med Chem (2018)

Release Date

2018-06-13

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin

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