SMTL ID : 5mt4.1

COMPLEMENT FACTOR D IN COMPLEX WITH A REVERSIBLE BENZOIC ACID BASED INHIBITOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x M7O: 2-[(phenylmethyl)carbamoylamino]benzoic acid(Non-covalent)

M7O.1: 13 residues within 4Å: Chain A: H.24, L.25, C.26, H.41, C.42, W.128, G.129, I.130, R.137, K.180, G.181, S.183, S.199 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.25, A:I.130, A:R.137 Hydrogen bonds: A:L.25, A:L.25, A:L.25, A:G.181, A:S.183 Salt bridges: A:K.180 pi-Cation interactions: A:R.137, A:K.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vulpetti, A. et al., Structure-Based Library Design and Fragment Screening for the Identification of Reversible Complement Factor D Protease Inhibitors. J. Med. Chem. (2017)

Release Date

2017-02-15

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Complement factor D

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