SMTL ID : 6fug.4 (5 other biounits)

Complement factor D in complex with the inhibitor 3-((3-((3-(aminomethyl)phenyl)amino)-1H-pyrazolo[3,4-d]pyrimidin-4-yl)amino)phenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

monomer

Ligands

1 x E85: 3-[[3-[[3-(aminomethyl)phenyl]amino]-1~{H}-pyrazolo[3,4-d]pyrimidin-4-yl]amino]phenol(Non-covalent)

E85.1: 12 residues within 4Å: Chain A: I.130, H.133, D.177, S.178, C.179, K.180, S.183, V.197, T.198, R.202, V.203, C.204 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.130, A:K.180, A:V.197 Hydrogen bonds: A:R.202, A:R.202, A:R.202, A:V.203 Water bridges: A:C.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vulpetti, A. et al., Discovery and Design of First Benzylamine-Based Ligands Binding to an Unlocked Conformation of the Complement Factor D. ACS Med Chem Lett (2018)

Release Date

2018-06-06

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Complement factor D

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