SMTL ID : 6fuj.1 (5 other biounits)

Complement factor D in complex with the inhibitor N-(3'-(aminomethyl)-[1,1'-biphenyl]-3-yl)-3-methylbutanamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x E8B: ~{N}-[3-[3-(aminomethyl)phenyl]phenyl]-3-methyl-butanamide(Non-covalent)

E8B.1: 12 residues within 4Å: Chain A: D.177, S.178, C.179, K.180, S.183, V.197, T.198, S.199, S.201, R.202, V.203, C.204 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:K.180, A:K.180, A:V.197 Hydrogen bonds: A:S.178, A:S.199 Water bridges: A:I.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vulpetti, A. et al., Discovery and Design of First Benzylamine-Based Ligands Binding to an Unlocked Conformation of the Complement Factor D. ACS Med Chem Lett (2018)

Release Date

2018-06-06

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Complement factor D

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