SMTL ID : 5o9z.1

Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-3-3-3-3-3-3-3-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
None
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Bertram, K. et al., Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation. Cell (2017)
Release Date
2017-08-16
Peptides
Pre-mRNA-processing-splicing factor 8: A
116 kDa U5 small nuclear ribonucleoprotein component: B
U5 small nuclear ribonucleoprotein 200 kDa helicase: C
U5 small nuclear ribonucleoprotein 40 kDa protein: D
U4/U6 small nuclear ribonucleoprotein Prp3: E
U4/U6 small nuclear ribonucleoprotein Prp4: F
Pre-mRNA-processing factor 6: G
U4/U6 small nuclear ribonucleoprotein Prp31: H
Pre-mRNA-splicing factor 38A: I
Thioredoxin-like protein 4A: J
Microfibrillar-associated protein 1: K
WD40 repeat-containing protein SMU1: L
Peptidyl-prolyl cis-trans isomerase H: M
Zinc finger matrin-type protein 2: N
NHP2-like protein 1: O
U4/U6.U5 tri-snRNP-associated protein 1: P
WW domain-binding protein 4: Q
Protein Red: R
Small nuclear ribonucleoprotein Sm D2: SZj
Small nuclear ribonucleoprotein F: T0k
Small nuclear ribonucleoprotein E: U1l
Small nuclear ribonucleoprotein G: V2m
Small nuclear ribonucleoprotein Sm D3: W3n
Small nuclear ribonucleoprotein-associated proteins B and B': X4o
Small nuclear ribonucleoprotein Sm D1: Y5p
U6 snRNA-associated Sm-like protein LSm2: 6
U6 snRNA-associated Sm-like protein LSm3: 7
U6 snRNA-associated Sm-like protein LSm4: 8
U6 snRNA-associated Sm-like protein LSm5: 9
U6 snRNA-associated Sm-like protein LSm6: a
U6 snRNA-associated Sm-like protein LSm7: b
U6 snRNA-associated Sm-like protein LSm8: c
Splicing factor 3B subunit 1: d
Splicing factor 3B subunit 3 (SF3B3): e
Splicing factor 3B subunit 5: f
PHD finger-like domain-containing protein 5A: g
U2 small nuclear ribonucleoprotein A': h
U2 small nuclear ribonucleoprotein B'': i
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
a
Z
h
j
S
T
b
0
i
k
T
U
c
1
j
l
U
V
d
2
k
m
V
W
e
3
l
n
W
X
f
4
m
o
X
Y
g
5
n
p
Z
6
o
7
p
8
q
9
r
a
s
b
t
c
u
d
v
e
w
f
x
g
y
h
z
i
1

Pre-mRNA-processing-splicing factor 8

116 kDa U5 small nuclear ribonucleoprotein component

U5 small nuclear ribonucleoprotein 200 kDa helicase

U5 small nuclear ribonucleoprotein 40 kDa protein

U4/U6 small nuclear ribonucleoprotein Prp3

U4/U6 small nuclear ribonucleoprotein Prp4

Pre-mRNA-processing factor 6

U4/U6 small nuclear ribonucleoprotein Prp31

Pre-mRNA-splicing factor 38A

Thioredoxin-like protein 4A

Microfibrillar-associated protein 1

WD40 repeat-containing protein SMU1

Peptidyl-prolyl cis-trans isomerase H

Zinc finger matrin-type protein 2

NHP2-like protein 1

U4/U6.U5 tri-snRNP-associated protein 1

WW domain-binding protein 4

Protein Red

Small nuclear ribonucleoprotein Sm D2

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein E

Toggle Identical (U1)

Small nuclear ribonucleoprotein G

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D1

U6 snRNA-associated Sm-like protein LSm2

U6 snRNA-associated Sm-like protein LSm3

U6 snRNA-associated Sm-like protein LSm4

U6 snRNA-associated Sm-like protein LSm5

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm8

Splicing factor 3B subunit 1

Splicing factor 3B subunit 3 (SF3B3)

Splicing factor 3B subunit 5

PHD finger-like domain-containing protein 5A

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein B''

Related Entries With Identical Sequence

1b34.1 | 1e7k.1 | 1e7k.2 | 1mzw.1 | 1qgv.1 | 1qoi.1 | 1syx.1 | 1syx.2 | 1syx.3 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13 | 4v98.14 | 4v98.15  more...
Protein chains which are C-Alpha only cannot be used for modelling!