SMTL ID : 7a5p.1

Human C Complex Spliceosome - Medium-resolution PERIPHERY

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-4-1-1-1-1-1-1-1-1-1-1-1-2-2-2-2-2-2-2-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Bertram, K. et al., Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome. Mol.Cell (2020)

Release Date

2020-10-14

Peptides

UNKNOWN: D
Pre-mRNA-processing-splicing factor 8: E
SNW domain-containing protein 1: F
Pre-mRNA-processing factor 17: G
Pre-mRNA-processing factor 19: HIJK
Pre-mRNA-splicing factor SPF27: L
Cell division cycle 5-like protein: M
Pre-mRNA-splicing factor SYF1: N
Pre-mRNA-splicing factor SYF2: O
Crooked neck-like protein 1: P
Pre-mRNA-splicing factor RBM22: Q
Serine/arginine repetitive matrix protein 2: R
Pre-mRNA-splicing factor CWC22 homolog: S
Intron-binding protein aquarius: T
U2 small nuclear ribonucleoprotein A': U
U2 small nuclear ribonucleoprotein B'': V
Small nuclear ribonucleoprotein Sm D3: X8
Small nuclear ribonucleoprotein-associated proteins B and B': Y9
Small nuclear ribonucleoprotein Sm D1: Za
Small nuclear ribonucleoprotein Sm D2: 04
Small nuclear ribonucleoprotein E: 16
Small nuclear ribonucleoprotein F: 25
Small nuclear ribonucleoprotein G: 37
Peptidyl-prolyl cis-trans isomerase E: b
WD repeat-containing protein 70: c
U5 small nuclear ribonucleoprotein 200 kDa helicase: d
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16: e
Pre-mRNA-splicing factor ISY1 homolog: f
Splicing factor YJU2: g
Protein mago nashi homolog: h
RNA-binding protein 8A: i
Protein FRG1: j
Eukaryotic initiation factor 4A-III: k
Peptidylprolyl isomerase domain and WD repeat-containing protein 1: l

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
8

E
A

F
C

G
E

H
G

I
H

J
I

K
J

L
K

M
L

N
M

O
N

P
O

Q
P

R
S

S
T

T
U

U
W

V
X

X
a

8
l

Y
b

9
m

Z
c

a
n

0
d

4
h

1
e

6
j

2
f

5
i

3
g

7
k

b
o

c
p

d
q

e
r

f
s

g
u

h
v

i
w

j
x

k
y

l
z

UNKNOWN

Pre-mRNA-processing-splicing factor 8

SNW domain-containing protein 1

Pre-mRNA-processing factor 17

Pre-mRNA-processing factor 19

Pre-mRNA-splicing factor SPF27

Cell division cycle 5-like protein

Pre-mRNA-splicing factor SYF1

Pre-mRNA-splicing factor SYF2

Crooked neck-like protein 1

Pre-mRNA-splicing factor RBM22

Serine/arginine repetitive matrix protein 2

Pre-mRNA-splicing factor CWC22 homolog

Intron-binding protein aquarius

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein B''

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D1

Small nuclear ribonucleoprotein Sm D2

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein G

Peptidyl-prolyl cis-trans isomerase E

WD repeat-containing protein 70

U5 small nuclear ribonucleoprotein 200 kDa helicase

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

Pre-mRNA-splicing factor ISY1 homolog

Splicing factor YJU2

Protein mago nashi homolog

RNA-binding protein 8A

Protein FRG1

Eukaryotic initiation factor 4A-III

Peptidylprolyl isomerase domain and WD repeat-containing protein 1

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