SMTL ID : 5vcw.1 (1 other biounit)

CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN IN COMPLEX WITH Pelitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x 93J: (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-3-cyano-7-ethoxyquinolin-6-yl}-4-(dimethylamino)but-2-enamide(Non-covalent)

93J.1: 17 residues within 4Å: Chain A: L.65, G.66, V.73, A.86, K.88, E.106, V.120, L.134, T.136, E.137, L.138, C.139, G.140, P.141, Q.144, Q.145, F.189 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.65, A:V.73, A:L.138, A:Q.145, A:F.189, A:F.189 Hydrogen bonds: A:T.136, A:C.139 Halogen bonds: A:L.134

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: Q.144, R.221 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.144 Salt bridges: A:R.221

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: Q.56, R.61, R.89 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.56, A:R.61, A:R.61, A:R.89, A:R.89 EDO.4: 3 residues within 4Å: Chain A: A.152, S.153, N.251 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.153, A:N.251 EDO.5: 5 residues within 4Å: Chain A: R.95, G.96, P.97, K.98, D.99 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.95, A:K.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J.Y. et al., Structural Basis of Wee Kinases Functionality and Inactivation by Diverse Small Molecule Inhibitors. J. Med. Chem. (2017)

Release Date

2017-08-23

Peptides

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase

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