SMTL ID : 5vd0.1

CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN IN COMPLEX WITH MK1775

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x 8X7: 1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one(Non-covalent)

8X7.1: 22 residues within 4Å: Chain A: L.65, G.66, Y.70, V.73, A.86, K.88, E.106, H.110, V.120, L.134, T.136, E.137, L.138, C.139, G.140, P.141, S.142, Q.145, A.186, N.187, F.189, D.200 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.65, A:L.65, A:Y.70, A:V.73, A:V.73, A:A.86, A:K.88, A:P.141, A:F.189, A:F.189 Hydrogen bonds: A:C.139, A:C.139 Water bridges: A:Y.70

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: R.61, L.62, S.63, R.64, F.74 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.61, A:R.61, A:R.64, A:R.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J.Y. et al., Structural Basis of Wee Kinases Functionality and Inactivation by Diverse Small Molecule Inhibitors. J. Med. Chem. (2017)

Release Date

2017-08-23

Peptides

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase

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