- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x EXG: 1-benzyl-1H-imidazo[4,5-b]pyridine(Non-covalent)
- 18 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: S.121, K.122
- Chain B: H.104, R.107
Ligand excluded by PLIPSO4.3: 6 residues within 4Å:- Chain A: G.9, T.10, K.42, R.88
- Ligands: EXG.1, DMS.6
Ligand excluded by PLIPSO4.4: 5 residues within 4Å:- Chain A: H.18, R.91, S.128, S.129
- Ligands: DMS.6
Ligand excluded by PLIPSO4.5: 6 residues within 4Å:- Chain A: S.39, P.40, S.41
- Chain C: E.134, H.138
- Ligands: EXG.1
Ligand excluded by PLIPSO4.8: 4 residues within 4Å:- Chain A: H.104, R.107
- Chain B: S.121, K.122
Ligand excluded by PLIPSO4.9: 4 residues within 4Å:- Chain B: H.18, R.91, S.128, S.129
Ligand excluded by PLIPSO4.11: 4 residues within 4Å:- Chain C: S.121, K.122
- Chain D: H.104, R.107
Ligand excluded by PLIPSO4.12: 6 residues within 4Å:- Chain C: G.9, T.10, K.42, R.88
- Ligands: EXG.10, DMS.15
Ligand excluded by PLIPSO4.13: 5 residues within 4Å:- Chain C: H.18, R.91, S.128, S.129
- Ligands: DMS.15
Ligand excluded by PLIPSO4.14: 6 residues within 4Å:- Chain C: S.39, P.40, S.41
- Chain E: E.134, H.138
- Ligands: EXG.10
Ligand excluded by PLIPSO4.17: 4 residues within 4Å:- Chain C: H.104, R.107
- Chain D: S.121, K.122
Ligand excluded by PLIPSO4.18: 4 residues within 4Å:- Chain D: H.18, R.91, S.128, S.129
Ligand excluded by PLIPSO4.20: 4 residues within 4Å:- Chain E: S.121, K.122
- Chain F: H.104, R.107
Ligand excluded by PLIPSO4.21: 6 residues within 4Å:- Chain E: G.9, T.10, K.42, R.88
- Ligands: EXG.19, DMS.24
Ligand excluded by PLIPSO4.22: 5 residues within 4Å:- Chain E: H.18, R.91, S.128, S.129
- Ligands: DMS.24
Ligand excluded by PLIPSO4.23: 6 residues within 4Å:- Chain A: E.134, H.138
- Chain E: S.39, P.40, S.41
- Ligands: EXG.19
Ligand excluded by PLIPSO4.26: 4 residues within 4Å:- Chain E: H.104, R.107
- Chain F: S.121, K.122
Ligand excluded by PLIPSO4.27: 4 residues within 4Å:- Chain F: H.18, R.91, S.128, S.129
Ligand excluded by PLIP- 3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
DMS.6: 6 residues within 4Å:- Chain A: Y.7, P.8, R.88, G.89
- Ligands: SO4.3, SO4.4
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.7, A:G.89
- Salt bridges: A:E.99
DMS.15: 6 residues within 4Å:- Chain C: Y.7, P.8, R.88, G.89
- Ligands: SO4.12, SO4.13
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:G.89
- Salt bridges: C:E.99
DMS.24: 6 residues within 4Å:- Chain E: Y.7, P.8, R.88, G.89
- Ligands: SO4.21, SO4.22
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:G.89
- Salt bridges: E:E.99
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Moreau, R.J. et al., Fragment-Based Drug Discovery of Inhibitors of Phosphopantetheine Adenylyltransferase from Gram-Negative Bacteria. J. Med. Chem. (2018)
- Release Date
- 2018-03-14
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x EXG: 1-benzyl-1H-imidazo[4,5-b]pyridine(Non-covalent)
- 18 x SO4: SULFATE ION(Non-functional Binders)
- 3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Moreau, R.J. et al., Fragment-Based Drug Discovery of Inhibitors of Phosphopantetheine Adenylyltransferase from Gram-Negative Bacteria. J. Med. Chem. (2018)
- Release Date
- 2018-03-14
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B