- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.79 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x EXP: 2-{[(3-bromophenyl)methyl]amino}-5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-7(6H)-one(Non-covalent)
- 15 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: S.121, K.122
- Chain B: H.104, R.107
10 PLIP interactions:4 interactions with chain B, 6 interactions with chain A- Water bridges: B:H.104, B:H.104, A:R.24, A:R.24, A:E.123, A:E.123
- Salt bridges: B:H.104, B:R.107, A:K.122
- Hydrogen bonds: A:K.122
SO4.3: 4 residues within 4Å:- Chain A: H.18, R.91, S.128, S.129
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.129
- Water bridges: A:S.130
- Salt bridges: A:H.18, A:R.91
SO4.4: 4 residues within 4Å:- Chain A: H.104, R.107
- Chain B: S.121, K.122
10 PLIP interactions:4 interactions with chain A, 6 interactions with chain B- Water bridges: A:H.104, A:H.104, B:R.24, B:E.123, B:E.123
- Salt bridges: A:H.104, A:R.107, B:K.122
- Hydrogen bonds: B:S.121, B:K.122
SO4.5: 5 residues within 4Å:- Chain B: R.137, H.138
- Chain D: S.39, P.40, S.41
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain D- Salt bridges: B:R.137, B:H.138
- Hydrogen bonds: D:S.41, D:S.41
- Water bridges: D:S.39
SO4.6: 4 residues within 4Å:- Chain B: H.18, R.91, S.128, S.129
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.129
- Water bridges: B:H.18, B:R.91, B:S.129
- Salt bridges: B:H.18, B:R.91
SO4.8: 4 residues within 4Å:- Chain C: S.121, K.122
- Chain D: H.104, R.107
10 PLIP interactions:4 interactions with chain D, 6 interactions with chain C- Water bridges: D:H.104, D:H.104, C:R.24, C:R.24, C:E.123, C:E.123
- Salt bridges: D:H.104, D:R.107, C:K.122
- Hydrogen bonds: C:K.122
SO4.9: 4 residues within 4Å:- Chain C: H.18, R.91, S.128, S.129
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.129
- Water bridges: C:S.130
- Salt bridges: C:H.18, C:R.91
SO4.10: 4 residues within 4Å:- Chain C: H.104, R.107
- Chain D: S.121, K.122
10 PLIP interactions:3 interactions with chain C, 7 interactions with chain D- Water bridges: C:H.104, D:R.24, D:K.122, D:E.123, D:E.123
- Salt bridges: C:H.104, C:R.107, D:K.122
- Hydrogen bonds: D:S.121, D:K.122
SO4.11: 5 residues within 4Å:- Chain D: R.137, H.138
- Chain F: S.39, P.40, S.41
5 PLIP interactions:2 interactions with chain D, 3 interactions with chain F- Salt bridges: D:R.137, D:H.138
- Hydrogen bonds: F:S.41, F:S.41
- Water bridges: F:S.39
SO4.12: 4 residues within 4Å:- Chain D: H.18, R.91, S.128, S.129
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:S.129
- Water bridges: D:H.18, D:R.91, D:S.129
- Salt bridges: D:H.18, D:R.91
SO4.14: 4 residues within 4Å:- Chain E: S.121, K.122
- Chain F: H.104, R.107
10 PLIP interactions:7 interactions with chain E, 3 interactions with chain F- Hydrogen bonds: E:K.122
- Water bridges: E:R.24, E:R.24, E:K.122, E:E.123, E:E.123, F:H.104
- Salt bridges: E:K.122, F:H.104, F:R.107
SO4.15: 4 residues within 4Å:- Chain E: H.18, R.91, S.128, S.129
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:S.129
- Water bridges: E:S.130
- Salt bridges: E:H.18, E:R.91
SO4.16: 4 residues within 4Å:- Chain E: H.104, R.107
- Chain F: S.121, K.122
10 PLIP interactions:7 interactions with chain F, 3 interactions with chain E- Hydrogen bonds: F:S.121, F:K.122
- Water bridges: F:R.24, F:K.122, F:E.123, F:E.123, E:H.104
- Salt bridges: F:K.122, E:H.104, E:R.107
SO4.17: 5 residues within 4Å:- Chain B: S.39, P.40, S.41
- Chain F: R.137, H.138
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain F- Hydrogen bonds: B:S.41, B:S.41
- Water bridges: B:S.39
- Salt bridges: F:R.137, F:H.138
SO4.18: 4 residues within 4Å:- Chain F: H.18, R.91, S.128, S.129
6 PLIP interactions:6 interactions with chain F- Hydrogen bonds: F:S.129
- Water bridges: F:H.18, F:R.91, F:S.129
- Salt bridges: F:H.18, F:R.91
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Moreau, R.J. et al., Fragment-Based Drug Discovery of Inhibitors of Phosphopantetheine Adenylyltransferase from Gram-Negative Bacteria. J. Med. Chem. (2018)
- Release Date
- 2018-03-14
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.79 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x EXP: 2-{[(3-bromophenyl)methyl]amino}-5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-7(6H)-one(Non-covalent)
- 15 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Moreau, R.J. et al., Fragment-Based Drug Discovery of Inhibitors of Phosphopantetheine Adenylyltransferase from Gram-Negative Bacteria. J. Med. Chem. (2018)
- Release Date
- 2018-03-14
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B