SMTL ID : 6fle.1

Crystal structure of ERK2 in complex with an adenosine derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Y.191, R.195, R.198, H.236, Y.237 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Y.237, A:Y.237 Salt bridges: A:R.195, A:R.198

1 x DQ2: [(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[3-(2-azanylethylamino)-3-oxidanylidene-propyl]sulfanyl-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylimino-azanylidene-azanium(Non-covalent)

DQ2.2: 19 residues within 4Å: Chain A: I.35, G.36, E.37, G.38, V.43, A.56, K.58, Q.109, D.110, L.111, M.112, D.115, K.118, K.155, S.157, N.158, L.160, C.170, D.171 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.37, A:D.110, A:M.112, A:K.118, A:N.158, A:N.158, A:D.171 Water bridges: A:K.58

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 4 residues within 4Å: Chain A: Y.117, K.155, S.157, T.194 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:Y.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Crystal structure of ERK2 in complex with an adenosine derivative. To be published

Release Date

2019-02-06

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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