SMTL ID : 6lxb.1

X-ray structure of human PPARalpha ligand binding domain-saroglitazar co-crystals obtained by soaking

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

monomer

Ligands

1 x EWR: (2S)-2-ethoxy-3-[4-[2-[2-methyl-5-(4-methylsulfanylphenyl)pyrrol-1-yl]ethoxy]phenyl]propanoic acid(Non-covalent)

EWR.1: 23 residues within 4Å: Chain A: I.77, F.78, C.80, C.81, Q.82, C.83, T.84, S.85, Y.119, F.123, L.126, M.135, V.137, A.138, Y.139, I.144, L.149, I.159, M.160, H.245, V.249, L.265, Y.269 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.77, A:F.78, A:Y.119, A:F.123, A:L.126, A:V.137, A:I.144, A:I.159 Hydrogen bonds: A:S.85, A:S.85, A:Y.119, A:Y.269 Salt bridges: A:H.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamata, S. et al., PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates. Iscience (2020)

Release Date

2020-11-11

Peptides

Peroxisome proliferator-activated receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor alpha

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