SMTL ID : 7fsw.1 (3 other biounits)

SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z169675004

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x YDX: N-(1-methyl-1H-pyrazol-3-yl)-2-(1H-pyrazol-1-yl)acetamide(Non-covalent)

YDX.1: 13 residues within 4Å: Chain A: N.112, G.113, N.134, I.135, V.143, I.144, G.145, L.146, I.151, F.172, I.176, M.179, P.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.145

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: I.29, D.30, F.170, I.171, H.174 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.30 Water bridges: A:D.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradshaw, W.J. et al., SDCBP PanDDA analysis group deposition. To Be Published

Release Date

2023-02-15

Peptides

Syntenin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Syntenin-1

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