SMTL ID : 8hun.1

X-ray structure of human PPAR alpha ligand binding domain-seladelpar co-crystals obtained by cross-seeding

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: K.27, R.31, L.34, S.127, S.128, V.129, M.130, N.131, N.171 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.31, A:R.31, A:M.130 Water bridges: A:K.27, A:N.171

1 x KKB: Seladelpar(Non-covalent)

KKB.2: 25 residues within 4Å: Chain A: I.46, L.52, E.56, L.59, V.60, I.77, F.78, C.80, C.81, Q.82, T.84, S.85, Y.119, L.126, M.135, V.137, A.138, I.144, L.149, I.159, M.160, H.245, V.249, L.265, Y.269 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.137, A:V.137, A:L.149, A:I.159 Hydrogen bonds: A:S.85, A:S.85, A:Y.119, A:Y.269 Salt bridges: A:H.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamata, S. et al., Functional and Structural Insights into the Human PPAR alpha / delta / gamma Targeting Preferences of Anti-NASH Investigational Drugs, Lanifibranor, Seladelpar, and Elafibranor. Antioxidants (2023)

Release Date

2023-08-09

Peptides

Peroxisome proliferator-activated receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor alpha

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