SMTL ID : 8qr2.1

Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.195, R.198 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.195 Salt bridges: A:R.195, A:R.198 SO4.2: 4 residues within 4Å: Chain A: H.303, K.304, R.305, Q.310 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.310, A:Q.310

1 x WNT: (4~{S},9~{S},10~{S},12~{E})-16-methoxy-4-methyl-9,10,18-tris(oxidanyl)-3-oxabicyclo[12.4.0]octadeca-1(18),12,14,16-tetraene-2,8-dione(Covalent)

WNT.3: 15 residues within 4Å: Chain A: I.35, E.37, G.38, A.56, I.88, Q.109, D.110, L.111, M.112, E.113, S.157, N.158, L.160, C.170, D.171 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:D.171 Hydrogen bonds: A:M.112, A:D.115 Water bridges: A:S.157, A:N.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand. To Be Published

Release Date

2025-04-16

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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