SMTL ID : 8qr4.1

Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.195, R.198, Y.237 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.195, A:R.195, A:Y.237, A:Y.237 Salt bridges: A:R.195, A:R.198 SO4.2: 4 residues within 4Å: Chain A: H.303, K.304, R.305, Q.310 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.305, A:Q.310

1 x WN8: (6~{S},7~{S},12~{S})-12-methyl-6,7,16,18-tetrakis(oxidanyl)-2,13-dioxabicyclo[13.4.0]nonadeca-1(19),15,17-triene-8,14-dione

WN8.3: 15 residues within 4Å: Chain A: I.35, E.37, G.38, V.43, A.56, Q.109, D.110, L.111, M.112, E.113, S.157, N.158, L.160, C.170, D.171 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.35, A:V.43, A:M.112, A:L.160, A:D.171 Hydrogen bonds: A:M.112, A:S.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand. To Be Published

Release Date

2025-04-16

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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