P63053 (RL40_PIG) Sus scrofa (Pig)

Ubiquitin-60S ribosomal protein L40 UniProtKBInterProSTRINGInteractive Modelling

128 aa; Sequence (Fasta) 73 identical sequences

Sequence Features

 68Essential for function
 3-74Ubiquitin-like domain
IPR000626PF00240
 78-127Ribosomal protein L40e
IPR001975PF01020

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: Rsp5 and UbV ... Heteromer
P39940; P62987;
5hpl1-77
Lys27-linked di-ubiquitin Heteromer
P0CG47; P62987;
MG;5god1-76
Lys63-linked di-ubiquitin Heteromer
P0CG47; P62987;
5goj1-76
Lys27-linked diubiquitin Heteromer
P62987;
MG;5j8p1-76
Structure of an active ligase (HOIP)/ubiquitin transfer complex Heteromer
P63048; Q96EP0;
ZN;IMD;4ljo1-76
Lys48-linked di-ubiquitin Heteromer
P0CG47; P62987;
5goi1-76
Lys27-linked triubiquitin Heteromer
P62987;
5jby1-76
Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin Heteromer
P62987; Q13137;
GOL;ZN;ACT;4xkl1-76
Lys27-linked triubiquitin Heteromer
P62987;
NO3;5jbv1-76
Structure of an active ligase (HOIP-H889A)/ubiquitin transfer complex Heteromer
P63048; Q96EP0;
ZN;4ljp1-76
Nedd4 HECT:Ub complex Heteromer
P46934; P63048;
GOL;2xbb1-76
Solution Structure of the Human FAAP20 UBZ-Ubiquitin Complex Heteromer
P62987; Q6NZ36;
ZN;2mur1-76
Solution structure of the Rpn1 T1 site engaging two monoubiquitin molecules Heteromer
P38764; P62987;
2n3u1-76
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode Heteromer
P38764; P62987;
2n3v1-76
'Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode' Heteromer
P38764; P62987;
2n3w1-76
NMR structure of EKLF(22-40)/Ubiquitin Complex Heteromer
P62987; Q13351;
2mbh1-76
Structure of the 26S proteasome-Ubp6 complex Heteromer
O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33297; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; P62987; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;
5a5b1-76
K11/K63-branched tri-Ubiquitin Heteromer
P0CG47; P62987;
5gok1-75
Crystal structure of the Middle-East respiratory syndrome coronavirus papain-like protease in com... Heteromer
M4STU1; P62987;
PGO;ZN;3CN;4rf11-75
'System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: NEDD4L and Ub... Heteromer
P62987; Q96PU5;
5hpk1-75
Crystal structure of a 53BP1 Tudor domain in complex with a ubiquitin variant Heteromer
P62987; Q12888;
5j261-75
Crystal structure of covalent ubiquitin-USP21 complex Heteromer
P62987; Q9UK80;
ZN;NEH;3i3t1-75
Crystal structure of the Middle-East respiratory syndrome coronavirus papain-like protease in com... Heteromer
M4STU1; P62987;
ZN;3CN;SO4;4rf01-75
'System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1, Ubv P2.... Heteromer
P62987; P68036; Q9H0M0;
5hpt1-75
Bro1 V domain and ubiquitin Heteromer
G0VBG6; P62987;
4jio1-75
Lys6-linked di-ubiquitin Heteromer
P0CG47; P62987;
5gob1-74
Linear tri-ubiquitin Heteromer
P0CG47; P62987;
5go71-74
Lys11-linked diubiquitin Heteromer
P0CG47; P62987;
NA;5goc1-73
Lys33-linked di-ubiquitin Heteromer
P0CG47; P62987;
5goh1-73
Lys29-linked di-ubiquitin Heteromer
P0CG47; P62987;
5gog1-73
'System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1 and UbV ... Heteromer
P62987; Q9H0M0;
5hps1-73
Linear tetra-ubiquitin Heteromer
P0CG47; P62987;
5go81-73
Crystal structure of TRABID NZF1 in complex with K29 linked di-Ubiquitin Heteromer
A6QP16; P62987;
ZN;4s1z1-73
Caught-in-action signaling complex of RIG-I 2CARD domain and MAVS CARD domain Heteromer
O95786; P62987; Q7Z434;
4p4h1-73
Structure of the idle mammalian ribosome-Sec61 complex Heteromer
A0A286ZL65; A0A287APR1; A0A287ASD0; A0A287B386; A0A4X1SH42; A0A4X1SN08; A0A4X1TBV3; A0A4X1TXJ8; A0A4X1V977; A0A4X1VIM4; A0A4X1W0N5; A0A4X1W808; A1XQU3; A1XQU5; F1SJJ5; F2Z568; I3LP78; P49666; P62901; P67985; Q29195; Q29205; Q29223; Q29361; Q2YGT9; Q6QAT0; Q95281;
130×MG;ZN;3j7q77-128
Structure of the mammalian 60S ribosomal subunit Heteromer
A1XQU3; A1XQU5; F1RGC0; F1S530; F1S935; F2Z522; F2Z546; F2Z554; F2Z567; F2Z568; I3L7Y1; I3LP78; I3LSD3; K7GP63; P49666; P62831; P62901; P67985; P83884; Q29205; Q29223; Q29361; Q6QAT0; Q95281; Q95342;
130×MG;ZN;3j7o77-128
Crystal structure of the ubiquitin K11S mutanthomo-4-mer NA;CA;CL;4pig1-76
X-ray crystal structure of the K33S mutant of ubiquitinhomo-2-mer CA;CL;4pih1-76
Crystal structure of K29 linked di-Ubiquitinhomo-2-mer IOD;EDO;4s221-76
X-ray crystal structure of the K11S/K63S double mutant of ubiquitinhomo-2-mer GOL;SO4;4pij1-75
U7Ub7 Disulfide variantmonomer PO4;4hjk1-76
Alternative structure of Ubiquitinmonomer 2rsu1-76
'NMR residual dipolar couplings identify long range correlated motions in the backbone of the pro...monomer 2kox1-76
'Description of the Structural fluctuations of proteins from structure-based calculations of Resi...monomer 2lj51-76
Solution nmr structure of ubiquitin refined against dipolar couplings in 4 mediamonomer 2mjb1-76
Solution structure of V26A mutant of Ubiquitin at pH 6.0monomer 2nbd1-76
Solution structure of V26A mutant of Ubiquitin at pH 2.0monomer 2nbe1-76
'Tailoring Encodable Lanthanide-Binding Tags as MRI Contrast Agents: xq-dSE3-Ubiquitin at 2.4 Ang...monomer GD;SO4;3vdz1-75
Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion proteinmonomer EDO;3ai57-71