Q05586 (NMDZ1_HUMAN) Homo sapiens (Human)
Glutamate receptor ionotropic, NMDA 1 UniProtKBInterProSTRINGInteractive Modelling
938 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7);
6 identical sequences: Pongo abelii: A0A2J8RMK4; Pan troglodytes: A0A803KLF7, C7G3M1; Macaca mulatta: F7G3Q5; Cercocebus atys: A0A2K5NMW9; Rhinopithecus bieti: A0AAJ7IJW9
Available Structures
52 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 6.3, C… |
Heteromer Q12879; | 99.87 | ||||
| Structure of the human GluN1/GluN2A NMDA receptor in the glycine/glutamate/GNE-6901 bound state |
Heteromer Q12879; | 99.87 | 14×NAG; 2×6RM; | |||
| Structure of the human GluN1/GluN2A NMDA receptor in the CGP-78608/glutamate bound state |
Heteromer Q12879; | 99.87 | 16×NAG; 2×J86; | |||
| Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 6.3, C… |
Heteromer Q12879; | 99.87 | ||||
| Structure of the human GluN1/GluN2A NMDA receptor in the glycine/glutamate bound state |
Heteromer Q12879; | 99.87 | 18×NAG; | |||
| Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 7.8 |
Heteromer Q12879; | 99.87 | ||||
| Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab5F6 in one fab bind conformation |
Heteromer Q12879; | 100.0 | 1×NAG; 8×NAG; | |||
| Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab5F6 in two fab bind conformation |
Heteromer Q12879; | 100.0 | 5×NAG; 8×NAG; | |||
| Structure of the human GluN1/GluN2A NMDA receptor in the glycine/glutamate/GNE-6901/9-AA bound state |
Heteromer Q12879; | 99.87 | 16×NAG; 1×AA; 2×6RM; | |||
| Structure of the human GluN1/GluN2A NMDA receptor in the glutamate/glycine-bound state at pH 6.3, C… |
Heteromer Q12879; | 99.87 | ||||
| Structure of the human GluN1/GluN2A NMDA receptor in the glycine/CPP bound state |
Heteromer Q12879; | 99.87 | 8×NAG; 2×7RC; | |||
| Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab2G7 in one fab conformation |
Heteromer Q12879; | 100.0 | 1×NAG; 8×NAG; | |||
| Structure of the human GluN1-GluN2A NMDA receptor in complex with S-ketamine, glycine and glutamate |
Heteromer Q12879; | 100.0 | 24×NAG; 2×GLY; 2×GLU; 1×JC9; | |||
| PYD-106-bound Human GluN1a-GluN2C NMDA receptor in splayed conformation |
Heteromer Q14957; | 100.0 | 1×NAG; 2×NAG; 8×NAG; | |||
| Structure of the human GluN1-GluN2B NMDA receptor in complex with S-ketamine,glycine and glutamate |
Heteromer Q13224; | 100.0 | 7×NAG; 1×JC9; | |||
| D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in splayed conformation |
Heteromer Q14957; | 100.0 | 2×NAG; 2×NAG; 8×NAG; | |||
| Human GluN1-2A With Fab 008-218 |
Heteromer Q12879; | 100.0 | ||||
| Human GluN1-2A with IgG 008-218 |
Heteromer Q12879; | 100.0 | ||||
| Human GluN1-2A IgG 003-102 splayed conformation |
Heteromer Q12879; | 100.0 | ||||
| Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab2G7 in two fab conformation |
Heteromer Q12879; | 100.0 | 1×NAG; 11×NAG; | |||
| Human GluN1-2B with Fab 007-168 |
Heteromer Q13224; | 99.75 | ||||
| Human GluN1-2A with Fab 003-102 |
Heteromer Q12879; | 100.0 | ||||
| Human GluN1-2A with IgG 003-102 WT conformation |
Heteromer Q12879; | 100.0 | ||||
| Structure of GluN1a-GluN2D NMDA receptor in complex with agonist glycine and competitive antagonist… |
Heteromer O15399; | 100.0 | 3×NAG; 7×NAG; 2×GLY; 2×7RC; | |||
| Human GluN1-2A with IgG 007-168 |
Heteromer A0A6P6HB11; | 100.0 | ||||
| D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in intact conformation |
Heteromer Q14957; | 100.0 | 6×NAG; 4×NAG; 7×NAG; | |||
| Glycine-bound GluN1a-3A NMDA receptor |
Heteromer Q8TCU5; | 99.86 | ||||
| Glycine and glutamate bound Human GluN1a-GluN2D NMDA receptor |
Heteromer O15399; | 100.0 | 2×GLY; 6×NAG; 2×GLU; | |||
| CNQX-bound GluN1a-3A NMDA receptor |
Heteromer Q8TCU5; | 99.72 | 2×DQC; | |||
| Structure of GluN1a E698C-GluN2D NMDA receptor in cystines crosslinked state. |
Heteromer O15399; | 99.84 | ||||
| D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in nanodisc - intact conformati… |
Heteromer Q14957; | 100.0 | 3×NAG; 9×NAG; | |||
| PYD-106-bound Human GluN1a-GluN2C NMDA receptor in intact conformation |
Heteromer Q14957; | 100.0 | 4×NAG; 1×NAG; 2×NAG; 8×NAG; 1×IWB; | |||
| Human GluN1a-GluN2A-GluN2C triheteromeric NMDA receptor in complex with Nb-4 |
Heteromer Q12879; Q14957; | 100.0 | 4×NAG; 2×NAG; | |||
| Structure of GluN1b-GluN2D NMDA receptor in complex with agonists glycine and glutamate. |
Heteromer O15399; | 100.0 | ||||
| Structure of GluN1a E698C-GluN2D NMDA receptor in cystines non-crosslinked state. |
Heteromer O15399; | 99.86 | 7×NAG; 2×GLY; 5×NAG; 2×GLU; | |||
| Structure of GluN1a-GluN2D NMDA receptor in complex with agonists glycine and glutamate. |
Heteromer O15399; | 100.0 | 4×NAG; 2×GLY; 10×NAG; 2×GLU; | |||
| Structure of the human GluN1/GluN2A LBD in complex with compound 9 (GNE3500) |
Heteromer Q12879; | 100.0 | 1×GLU; 1×7H2; 1×GLY; | |||
| Structure of the human GluN1/GluN2A LBD in complex with 7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-… |
Heteromer Q12879; | 100.0 | 1×GLU; 1×GLY; 1×67H; | |||
| Glycine-bound GluN1a-3A LBD heterotetramer (local refinement) |
Heteromer Q8TCU5; | 99.65 | ||||
| Structure of the human GluN1/GluN2A LBD in complex with compound 2 (GNE9178) |
Heteromer Q12879; | 100.0 | 1×ACT; 1×GLU; 1×7H0; 1×CA; 1×GLY; | |||
| Structure of the human GluN1/GluN2A LBD in complex with GNE0723 |
Heteromer Q12879; | 100.0 | 1×ACT; 1×GLU; 1×6RV; 1×GLY; | |||
| Structure of the apo human GluN1/GluN2A LBD |
Heteromer Q12879; | 100.0 | 6×GOL; 1×GLU; 1×GLY; | |||
| Structure of the human GluN1/GluN2A LBD in complex with N-ethyl-7-{[2-fluoro-3-(trifluoromethyl)phe… |
Heteromer Q12879; | 100.0 | 1×CA; 1×GLU; 1×67J; 1×EPE; 1×GLY; | |||
| Structure of the human GluN1/GluN2A LBD in complex with GNE3419 |
Heteromer Q12879; | 100.0 | 1×ACT; 1×GLU; 1×CA; 1×GLY; 1×5YC; | |||
| Structure of the human GluN1/GluN2A LBD in complex with NAM |
Heteromer Q12879; | 100.0 | 1×GLU; 1×5YD; 1×CA; 1×GLY; | |||
| Structure of the human GluN1/GluN2A LBD in complex with GNE8324 |
Heteromer Q12879; | 100.0 | 1×ACT; 1×GLU; 1×GLY; 1×5YE; | |||
| Structure of the human GluN1/GluN2A LBD in complex with GNE6901 |
Heteromer Q12879; | 100.0 | 1×ACT; 1×GLU; 1×GLY; 1×6RM; | |||
| Human GluN1-2B with Fab 007-168 Local refinement of ATD |
Heteromer Q13224; | 98.92 | ||||
| Human GluN1-2A with Fab 008-218 Local refinement of ATD |
Heteromer Q12879; | 100 | ||||
| Human GluN1-2A with Fab 003-102 Local refinement of ATD |
Heteromer Q12879; | 100 | ||||
| Structure of a Calmodulin Complex |
Heteromer P0DP23; | 100 | 4×CA; | |||
| TRANSMEMBRANE SEGMENT 2 OF NMDA RECEPTOR NR1, NMR, 10 STRUCTURES | monomer | 100 | ||||
4 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 6whw.1.A | monomer | 0.71 | 97.97 | |||
| 5kdt.1.B | monomer | 0.61 | 87.06 | |||
| 5kbu.1.B | monomer | 0.54 | 30.99 | |||
| 5kbu.1.A | monomer | 0.54 | 30.99 | |||
24 SWISS-MODEL models built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 2 | 6whw.1.A | monomer | 0.70 | 97.80 | |||
| Isoform 2 | 4nf6.1.A | monomer | 0.56 | 1×GLY; | 94.81 | ||
| Isoform 2 | 5kbu.1.A | monomer | 0.54 | 30.99 | |||
| Isoform 2 | 5kbu.1.B | monomer | 0.54 | 30.99 | |||
| Isoform 3 | 6whw.1.A | monomer | 0.71 | 97.89 | |||
| Isoform 3 | 5kdt.1.B | monomer | 0.62 | 87.06 | |||
| Isoform 3 | 5kbu.1.A | monomer | 0.54 | 30.99 | |||
| Isoform 3 | 5kbu.1.B | monomer | 0.54 | 30.99 | |||
| Isoform 4 | 6whw.1.A | monomer | 0.71 | 97.89 | |||
| Isoform 4 | 4nf6.1.A | monomer | 0.56 | 1×GLY; | 94.81 | ||
| Isoform 4 | 7rz4.1.B | monomer | 0.54 | 30.99 | |||
| Isoform 4 | 7rz4.1.A | monomer | 0.54 | 30.99 | |||
| Isoform 5 | 6whw.1.A | monomer | 0.69 | 98.02 | |||
| Isoform 5 | 5kdt.1.B | monomer | 0.60 | 87.06 | |||
| Isoform 5 | 5vou.1.E | monomer | 0.59 | 34.48 | |||
| Isoform 5 | 7ldd.1.D | monomer | 0.56 | 34.78 | |||
| Isoform 6 | 6whw.1.A | monomer | 0.69 | 97.94 | |||
| Isoform 6 | 5kdt.1.B | monomer | 0.60 | 87.06 | |||
| Isoform 6 | 5vou.1.E | monomer | 0.58 | 34.29 | |||
| Isoform 6 | 7ldd.1.D | monomer | 0.57 | 34.78 | |||
| Isoform 7 | 6whw.1.A | monomer | 0.69 | 97.85 | |||
| Isoform 7 | 5vou.1.E | monomer | 0.58 | 34.38 | |||
| Isoform 7 | 2a5t.1.A | monomer | 0.58 | 1×GLY; | 94.81 | ||
| Isoform 7 | 6ucb.1.B | monomer | 0.56 | 34.38 | |||