SMTL ID : 1bm7.1

HUMAN TRANSTHYRETIN (PREALBUMIN) COMPLEX WITH FLUFENAMIC ACID (2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x FLF: 2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID(Non-covalent)

FLF.1: 14 residues within 4Å: Chain A: K.15, T.106, A.108, A.109, L.110, S.117, T.118, T.119, V.121 Chain C: K.15, L.17, A.108, L.110 Ligands: FLF.3 10 PLIP interactions: 4 interactions with chain C, 6 interactions with chain A Hydrophobic interactions: C:L.17, C:A.108, C:L.110, A:K.15, A:T.106, A:A.108, A:T.119, A:V.121 Salt bridges: C:K.15, A:K.15 FLF.2: 15 residues within 4Å: Chain B: K.15, T.106, A.108, A.109, L.110, S.117, T.118, T.119, V.121 Chain D: K.15, L.17, A.108, L.110, T.119 Ligands: FLF.4 10 PLIP interactions: 6 interactions with chain B, 4 interactions with chain D Hydrophobic interactions: B:K.15, B:T.106, B:A.108, B:T.119, B:V.121, D:L.17, D:A.108, D:T.119 Salt bridges: B:K.15, D:K.15 FLF.3: 14 residues within 4Å: Chain A: K.15, L.17, A.108, L.110 Chain C: K.15, T.106, A.108, A.109, L.110, S.117, T.118, T.119, V.121 Ligands: FLF.1 10 PLIP interactions: 6 interactions with chain C, 4 interactions with chain A Hydrophobic interactions: C:K.15, C:T.106, C:A.108, C:T.119, C:V.121, A:L.17, A:A.108, A:L.110 Salt bridges: C:K.15, A:K.15 FLF.4: 15 residues within 4Å: Chain B: K.15, L.17, A.108, L.110, T.119 Chain D: K.15, T.106, A.108, A.109, L.110, S.117, T.118, T.119, V.121 Ligands: FLF.2 10 PLIP interactions: 4 interactions with chain B, 6 interactions with chain D Hydrophobic interactions: B:L.17, B:A.108, B:T.119, D:K.15, D:T.106, D:A.108, D:T.119, D:V.121 Salt bridges: B:K.15, D:K.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peterson, S.A. et al., Inhibiting transthyretin conformational changes that lead to amyloid fibril formation. Proc.Natl.Acad.Sci.USA (1998)

Release Date

1998-08-05

Peptides

PROTEIN (TRANSTHYRETIN): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

PROTEIN (TRANSTHYRETIN)

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