- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-oligomer
- Ligands
- 1 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.6: 22 residues within 4Å:- Chain A: F.181, A.184, L.185, A.188, L.189, L.219
- Chain B: G.63, L.64, F.67, A.125, V.126, W.129, T.146, A.149, F.150, A.153, A.273, T.277
- Ligands: BCL.2, BCL.4, SPO.8, U10.10
10 PLIP interactions:4 interactions with chain A, 6 interactions with chain B- Hydrophobic interactions: A:F.181, A:A.184, A:A.188, A:L.189, B:L.64, B:F.67, B:F.67, B:F.150, B:F.150, B:F.150
BPH.7: 22 residues within 4Å:- Chain A: A.42, I.46, I.89, A.93, A.96, W.100, E.104, I.117, A.120, F.121, F.123, A.124, F.146, Y.148, L.238, V.241
- Chain B: Y.210, A.213, L.214, M.218
- Ligands: BCL.3, BCL.5
16 PLIP interactions:14 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:A.42, A:I.46, A:I.89, A:A.93, A:A.96, A:I.117, A:F.121, A:F.121, A:F.123, A:F.146, A:Y.148, A:Y.148, A:L.238, A:V.241, B:Y.210, B:A.213
- 1 x SPO: SPHEROIDENE(Non-covalent)
SPO.8: 19 residues within 4Å:- Chain B: W.66, F.67, F.68, I.70, F.74, W.75, F.85, W.115, S.119, M.122, F.123, W.157, G.161, F.162, V.175, Y.177, G.178
- Ligands: BCL.2, BPH.6
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:W.66, B:F.67, B:F.67, B:I.70, B:F.74, B:F.85, B:W.115, B:F.123, B:F.123, B:F.123, B:W.157, B:W.157, B:F.162, B:F.162, B:V.175, B:Y.177, B:Y.177
- 2 x U10: UBIQUINONE-10(Non-covalent)
U10.9: 16 residues within 4Å:- Chain A: F.29
- Chain B: L.215, M.218, H.219, T.222, A.248, A.249, W.252, M.256, N.259, A.260, T.261, I.265, W.268
- Ligands: BCL.3, BCL.5
9 PLIP interactions:1 interactions with chain A, 8 interactions with chain B- Hydrophobic interactions: A:F.29, B:L.215, B:M.218, B:I.265, B:W.268, B:W.268
- Hydrogen bonds: B:T.222, B:N.259, B:A.260
U10.10: 16 residues within 4Å:- Chain A: A.186, L.189, H.190, L.193, E.212, D.213, F.216, V.220, S.223, I.224, G.225, I.229, L.232
- Ligands: BCL.2, BCL.4, BPH.6
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:L.189, A:H.190, A:F.216, A:V.220, A:I.229, A:I.229, A:L.232
- Hydrogen bonds: A:E.212, A:Y.222, A:I.224, A:G.225
- pi-Stacking: A:F.216
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Arnoux, B. et al., Structure of the photochemical reaction centre of a spheroidene-containing purple-bacterium, Rhodobacter sphaeroides Y, at 3 A resolution. Acta Crystallogr.,Sect.D (1995)
- Release Date
- 1995-02-27
- Peptides
- PHOTOSYNTHETIC REACTION CENTER (L SUBUNIT): A
PHOTOSYNTHETIC REACTION CENTER (M SUBUNIT): B
PHOTOSYNTHETIC REACTION CENTER (H SUBUNIT): C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LB
MC
H - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 1yst.1
STRUCTURE OF THE PHOTOCHEMICAL REACTION CENTER OF A SPHEROIDENE CONTAINING PURPLE BACTERIUM, RHODOBACTER SPHAEROIDES Y, AT 3 ANGSTROMS RESOLUTION
PHOTOSYNTHETIC REACTION CENTER (L SUBUNIT)
PHOTOSYNTHETIC REACTION CENTER (M SUBUNIT)
PHOTOSYNTHETIC REACTION CENTER (H SUBUNIT)
Related Entries With Identical Sequence
1e14.1 | 1e6d.1 | 1f6n.1 | 1fnp.1 | 1fnq.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1jh0.1 | 1k6l.1 | 1k6n.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1pcr.1 | 1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1ry5.1 | 1rzh.1 | 1rzz.1 | 1rzz.2 | 1s00.1 | 1s00.2 | 1umx.1 more...less...1yf6.1 | 1z9j.1 | 1z9k.1 | 1z9k.2 | 2bnp.1 | 2bns.1 | 2boz.1 | 2gmr.1 | 2hg3.1 | 2hg9.1 | 2hh1.1 | 2hhk.1 | 2hit.1 | 2hj6.1 | 2j8c.1 | 2j8d.1 | 2jiy.1 | 2jj0.1 | 2rcr.1 | 2uws.1 | 2uwt.1 | 2uwu.1 | 2uwv.1 | 2uww.1 | 2ux3.1 | 2ux4.1 | 2ux5.1 | 2uxj.1 | 2uxk.1 | 2uxl.1 | 2uxm.1 | 2wx5.1 | 3dsy.1 | 3dta.1 | 3dtr.1 | 3dts.1 | 3du2.1 | 3du3.1 | 3duq.1 | 3i4d.1 | 3zum.1 | 3zuw.1 | 4h99.1 | 4h9l.1 | 4hbh.1 | 4hbj.1 | 4lwy.1 | 4rcr.1 | 4v9g.30 | 4v9g.62 | 5lri.1 | 5lse.1 | 7va9.3 | 7va9.35 | 7vb9.1 | 7vnm.1 | 7vny.1 | 7vor.3 | 7vor.36 | 7vot.3 | 7vot.36 | 7voy.1